GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for xylG (ABC transporter for xylose, ATP-binding component xylG) in D-xylose catabolism

Or see other characterized proteins similar to xylG

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Definition of xylG

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 494-525 amino acids (heteromeric)

The first sequence in each cluster is the seed.

b3567 xylose ABC transporter ATP binding subunit (EC; EC from Escherichia coli K-12 substr. MG1655
XYLG_ECOLI / P37388 Xylose import ATP-binding protein XylG; EC from Escherichia coli (strain K12)
TC 3.A.1.2.4 / P37388 XylG aka B3567, component of Xylose porter from Escherichia coli
P37388 xylose ABC transporter ATP binding subunit (EC from Escherichia coli (strain K12)
GB|AAC76591.1 D-xylose ABC transporter, ATP-binding protein; EC from Escherichia coli K12
PFams: ABC_tran, ABC_tran
Heteromeric, 513 amino acids: PaperBLAST, CDD, Compare to cluster

TC 3.A.1.2.26 / A6LW11 Xylose import ATP-binding protein XylG, component of Xylose transporter, XylFGH (XylF (R), 359 aas; XylG (C), 525 aas; XylH (M), 389 aas from Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
PFams: ABC_tran, ABC_tran
Heteromeric, 525 amino acids: PaperBLAST, CDD, Compare to cluster

TC 3.A.1.2.20 / G4FGN3 Monosaccharide-transporting ATPase, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: ABC_tran, ABC_tran
Heteromeric, 494 amino acids: PaperBLAST, CDD, Compare to cluster

TC 3.A.1.2.5 / O05176 GguA aka ATU2347 aka AGR_C_4264, component of Multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter from Agrobacterium radiobacter
PFams: ABC_tran, ABC_tran
Heteromeric, 512 amino acids: PaperBLAST, CDD, Compare to cluster