Clusters of Characterized Proteins

Clustering the characterized proteins for xylH (ABC transporter for xylose, permease component xylH) in D-xylose catabolism

Or see other characterized proteins similar to xylH

Or see all steps for D-xylose catabolism

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Definition of xylH

• Curated sequence A6LW12: Monosaccharide-transporting ATPase, component of Xylose transporter, XylFGH (XylF (R), 359 aas; XylG (C), 525 aas; XylH (M), 389 aas
• Curated sequence CH_024441: D-xylose ABC transporter, permease protein. Xylose transport system permease protein XylH aka B3568, component of Xylose porter. xylose ABC transporter membrane subunit (EC 7.5.2.13; EC 7.5.2.10). xylose ABC transporter membrane subunit (EC 7.5.2.13)
• Curated sequence G4FGN4: Putative beta-xyloside ABC transporter, permease component, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR
• Curated sequence O05177: GguB aka ATU2346 aka AGR_C_4262, component of Multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Agrobacterium radiobacter

TC 3.A.1.2.5 / O05177 GguB aka ATU2346 aka AGR_C_4262, component of Multiple sugar (arabinose, xylose, galactose, glucose, fucose) putative porter from Agrobacterium radiobacter
PFams: BPD_transp_2
Heteromeric, 398 amino acids: PaperBLAST, CDD (Cluster 1)

Clostridium beijerinckii

TC 3.A.1.2.26 / A6LW12 Monosaccharide-transporting ATPase, component of Xylose transporter, XylFGH (XylF (R), 359 aas; XylG (C), 525 aas; XylH (M), 389 aas from Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
PFams: BPD_transp_2
Heteromeric, 389 amino acids: PaperBLAST, CDD (Cluster 1)

Escherichia coli

b3568 xylose ABC transporter membrane subunit (EC 7.5.2.13; EC 7.5.2.10) from Escherichia coli K-12 substr. MG1655
P0AGI4 xylose ABC transporter membrane subunit (EC 7.5.2.13) from Escherichia coli (strain K12)
TC 3.A.1.2.4 / P0AGI4 Xylose transport system permease protein XylH aka B3568, component of Xylose porter from Escherichia coli
RF|NP_418025 D-xylose ABC transporter, permease protein from Escherichia coli K12
PFams: BPD_transp_2
Heteromeric, 393 amino acids: PaperBLAST, CDD (Cluster 1)

Thermotoga maritima

TC 3.A.1.2.20 / G4FGN4 Putative beta-xyloside ABC transporter, permease component, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: BPD_transp_2
Heteromeric, 313 amino acids: PaperBLAST, CDD (Cluster 1)