PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for D-alanine%dehydrogenase as complete word(s)

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Found 6 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 432-445 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

DADA1_PSEAE / Q9HTQ0 D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9HTQ0 D-arginine dehydrogenase (EC 1.4.99.6) from Pseudomonas aeruginosa
PFams: DAO, NAD_binding_8
432 amino acids: PaperBLAST, CDD, Compare to cluster

DADA_KLEAE / O30745 D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Klebsiella aerogenes (Enterobacter aerogenes)
PFams: DAO, NAD_binding_8
432 amino acids: PaperBLAST, CDD, Compare to cluster

b1189 D-amino acid dehydrogenase (EC 1.4.5.1) from Escherichia coli K-12 substr. MG1655
DADA_ECOLI / P0A6J5 D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Escherichia coli (strain K12)
P0A6J5 D-amino acid dehydrogenase (EC 1.4.5.1) from Escherichia coli (strain K12)
PFams: DAO, Pyr_redox, NAD_binding_8
432 amino acids: PaperBLAST, CDD, Compare to cluster

Ac3H11_4848 D-alanine dehydrogenase (EC 1.4.99.-) from Acidovorax sp. GW101-3H11
PFams: DAO, NAD_binding_8
445 amino acids: PaperBLAST, CDD, Compare to cluster

AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense Sp245
PFams: UDPG_MGDP_dh_N, DAO, Pyr_redox, NAD_binding_8
436 amino acids: PaperBLAST, CDD, Compare to cluster

Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri RCH2
PFams: DAO, NAD_binding_8
432 amino acids: PaperBLAST, CDD, Compare to cluster