PaperBLAST – Find papers about a protein or its homologs

 

Similarities of Characterized Proteins

Comparing 5 sequences

Query

b4208 D-serine/alanine/glycine/:H+symporter from Escherichia coli K-12 substr. MG1655
CYCA_ECOLI / P0AAE0 D-serine/D-alanine/glycine transporter from Escherichia coli (strain K12)
TC 2.A.3.1.7 / P0AAE0 D-Serine/D-alanine/glycine/D-cycloserine:H+ symporter from Escherichia coli
P0AAE0 D-serine/alanine/glycine/:H+symporter from Escherichia coli (strain K12)
470 amino acids: PaperBLAST, CDD

Other Sequences with Hits

CYCA_ECOL6 / A0A0H2VDI7 D-serine/D-alanine/glycine transporter from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
470 amino acids: PaperBLAST, CDD
98% identical to query, 100% coverage

TC 2.A.3.1.17 / M1IW84 D-serine/L-alanine/D-alanine/glycine/D-cycloserine uptake porter of 556 aas, CycA from Mycobacterium bovis BCG str. Korea 1168P
556 amino acids: PaperBLAST, CDD
59% identical to query, 82% coverage

TC 2.A.3.1.20 / F2HQ24 Serine transporter, SerP2 or YdgB, of 459 aas and 12 TMSs (Trip et al. 2013). Transports L-alanine (Km = 20 μM), D-alanine (Km = 38 μM), L-serine, D-serine (Km = 356 μM) and glycine (Noens and Lolkema 2015). The encoding gene is adjacent to the one encoding SerP1 (TC# 2.A.3.1.21) from Lactococcus lactis subsp. lactis (strain CV56)
457 amino acids: PaperBLAST, CDD
42% identical to query, 97% coverage

SERP2_LACLM / A2RI86 DL-alanine permease SerP2 from Lactococcus lactis subsp. cremoris (strain MG1363)
460 amino acids: PaperBLAST, CDD
41% identical to query, 97% coverage

Other Sequences without Hits

None