PaperBLAST – Find papers about a protein or its homologs

 

Similarities of Characterized Proteins

Comparing 8 sequences

Query

TC 2.A.3.1.17 / M1IW84 D-serine/L-alanine/D-alanine/glycine/D-cycloserine uptake porter of 556 aas, CycA from Mycobacterium bovis BCG str. Korea 1168P
556 amino acids: PaperBLAST, CDD

Other Sequences with Hits

b4208 D-serine/alanine/glycine/:H+symporter from Escherichia coli K-12 substr. MG1655
P0AAE0 D-serine/alanine/glycine/:H+symporter from Escherichia coli (strain K12)
CYCA_ECOLI / P0AAE0 D-serine/D-alanine/glycine transporter from Escherichia coli (strain K12)
TC 2.A.3.1.7 / P0AAE0 D-Serine/D-alanine/glycine/D-cycloserine:H+ symporter from Escherichia coli
470 amino acids: PaperBLAST, CDD
59% identical to query, 82% coverage

PS417_05405 L-alanine and D-alanine permease from Pseudomonas simiae WCS417
472 amino acids: PaperBLAST, CDD
42% identical to query, 70% coverage

TC 2.A.3.1.20 / F2HQ24 Serine transporter, SerP2 or YdgB, of 459 aas and 12 TMSs (Trip et al. 2013). Transports L-alanine (Km = 20 μM), D-alanine (Km = 38 μM), L-serine, D-serine (Km = 356 μM) and glycine (Noens and Lolkema 2015). The encoding gene is adjacent to the one encoding SerP1 (TC# 2.A.3.1.21) from Lactococcus lactis subsp. lactis (strain CV56)
457 amino acids: PaperBLAST, CDD
41% identical to query, 69% coverage

AO356_17670 L-alanine and D-alanine permease from Pseudomonas fluorescens FW300-N2C3
473 amino acids: PaperBLAST, CDD
40% identical to query, 78% coverage

SERP2_LACLM / A2RI86 DL-alanine permease SerP2 from Lactococcus lactis subsp. cremoris (strain MG1363)
460 amino acids: PaperBLAST, CDD
40% identical to query, 70% coverage

AO353_16120 D-alanine and L-alanine transporter from Pseudomonas fluorescens FW300-N2E3
472 amino acids: PaperBLAST, CDD
39% identical to query, 78% coverage

TC 2.A.3.10.22 / Q2VQZ4 Arbuscular mycorrhizal fungal proline:H+ symporter, AAP1 (binds and probably transports nonpolar, hydrophobic amino acids) from Glomus mosseae
536 amino acids: PaperBLAST, CDD
33% identical to query, 71% coverage

Other Sequences without Hits

None