PaperBLAST – Find papers about a protein or its homologs

 

Similarities of Characterized Proteins

Comparing 7 sequences

Query

TC 3.A.1.3.23 / Q9HU29 Amino acid (Lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein, component of Amino acid transporter, PA5152-PA5155. Probably transports numerous amino acids including lysine, arginine, histidine, D-alanine and D-valine (Johnson et al. 2008). Regulated by ArgR from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (heteromeric)
230 amino acids: PaperBLAST, CDD

Other Sequences with Hits

AO356_09910 ABC transporter for L-Lysine, permease component 2 from Pseudomonas fluorescens FW300-N2C3 (heteromeric)
229 amino acids: PaperBLAST, CDD
71% identical to query, 99% coverage

b2307 lysine/arginine/ornithine ABC transporter / histidine ABC transporter, membrane subunit HisM (EC 7.4.2.1) from Escherichia coli K-12 substr. MG1655 (heteromeric)
HISM_ECOLI / P0AEU3 Histidine transport system permease protein HisM from Escherichia coli (strain K12) (heteromeric)
TC 3.A.1.3.29 / P0AEU3 Histidine transport system permease protein HisM, component of Histidine/Arginine/Lysine (basic amino acid) uptake porter, HisJ/ArgT/HisP/HisM/HisQ [R, R, C, M, M, respectively] (Gilson et al. 1982). HisJ binds L-His (preferred), but 1-methyl-L-His and 3-methyl-L-His also bind, while the dipeptide carnosine binds weakly; D-histidine and the histidine degradation products, histamine, urocanic acid and imidazole do not bind. L-Arg, homo-L-Arg, and post-translationally modified methylated Arg-analogs also bind with the exception of symmetric dimethylated-L-Arg. L-Lys and L-Orn show weaker interactions with HisJ and methylated and acetylated Lys variants show poor binding.The carboxylate groups of these amino acids and their variants are essential from Escherichia coli (strain K12) (heteromeric)
238 amino acids: PaperBLAST, CDD
46% identical to query, 88% coverage

HISM_SALTY / P0A2I7 Histidine transport system permease protein HisM from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (heteromeric)
TC 3.A.1.3.1 / P0A2I7 Histidine transport system permease protein HisM aka STM2352, component of Histidine/arginine/lysine/ornithine porter (Heuveling et al. 2014). In contrast to some homologous homodimeric systems, the heterodimeric histidine transporter of Salmonella enterica Typhimurium from Salmonella typhimurium (heteromeric)
235 amino acids: PaperBLAST, CDD
44% identical to query, 89% coverage

AO356_05505 ABC transporter for L-Lysine, permease component 2 from Pseudomonas fluorescens FW300-N2C3 (heteromeric)
236 amino acids: PaperBLAST, CDD
41% identical to query, 88% coverage

Pf6N2E2_2960 ABC transporter for L-Lysine, permease component 2 from Pseudomonas fluorescens FW300-N2E2 (heteromeric)
236 amino acids: PaperBLAST, CDD
41% identical to query, 88% coverage

Q88GX2 SubName: Full=Amino acid ABC transporter, membrane protein {ECO:0000313|EMBL:AAN69195.1};
236 amino acids: PaperBLAST, CDD
37% identical to query, 91% coverage

Other Sequences without Hits

None