Alignments for a candidate for trpD_1 in Azospirillum brasilense Sp245

Align Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 (characterized)
to candidate AZOBR_RS07460 AZOBR_RS07460 anthranilate synthase

Query= SwissProt::P26922
         (196 letters)



>FitnessBrowser__azobra:AZOBR_RS07460
          Length = 196

 Score =  390 bits (1003), Expect = e-114
 Identities = 192/196 (97%), Positives = 193/196 (98%)

Query: 1   MLLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAG 60
           MLLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAG
Sbjct: 1   MLLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAG 60

Query: 61  ICLPLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPVPMHGKVDRMFHQGRGVLKDLP 120
           ICLPLIDAAAKA VPLMGVCLGHQAIGQ FGGTV+RAPVPMHGKVDRMFHQGRGVLKDLP
Sbjct: 61  ICLPLIDAAAKAGVPLMGVCLGHQAIGQAFGGTVLRAPVPMHGKVDRMFHQGRGVLKDLP 120

Query: 121 SPFRATRYHSLIVERATLPACLEVTGETEDGLIMALSHRELPIHGVQFHPESIESEHGHK 180
           SPFRATRYHSLIVERATLPACLEVTGETEDGLIMALSH ELPIHGVQFHPESIESEHGHK
Sbjct: 121 SPFRATRYHSLIVERATLPACLEVTGETEDGLIMALSHCELPIHGVQFHPESIESEHGHK 180

Query: 181 ILENFLNTTRRLETAA 196
           ILENFLNTTRRLETAA
Sbjct: 181 ILENFLNTTRRLETAA 196


Lambda     K      H
   0.321    0.140    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 276
Number of extensions: 6
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 196
Length adjustment: 20
Effective length of query: 176
Effective length of database: 176
Effective search space:    30976
Effective search space used:    30976
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)

Align candidate AZOBR_RS07460 AZOBR_RS07460 (anthranilate synthase)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.28112.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.28112.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.