Alignments for a candidate for cysE in Azospirillum brasilense Sp245

Align serine O-acetyltransferase (EC 2.3.1.30) (characterized)
to candidate AZOBR_RS25375 AZOBR_RS25375 serine acetyltransferase

Query= BRENDA::Q0ZB96
         (273 letters)



>FitnessBrowser__azobra:AZOBR_RS25375
          Length = 260

 Score =  303 bits (776), Expect = 2e-87
 Identities = 146/250 (58%), Positives = 186/250 (74%), Gaps = 1/250 (0%)

Query: 9   VWNNIKAEARALADCEPMLASFYHATLLKHENLGSALSYMLANKLASPIMPAIAIREVVE 68
           +W  ++ EA A+AD +P+L  F H  +L H+   SAL   LA KL    +PA  + ++ E
Sbjct: 1   LWARLRTEAEAVADGDPLLRGFIHIVVLSHDGFASALGGHLARKLGDWYIPAERLADITE 60

Query: 69  EAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWTQGRRAL 128
           +A+A DP ++A+A  D+ A+ TRDPA D   TP LY KGFHALQ +R+ HWLW QGRR L
Sbjct: 61  QAHAGDPGIVAAAVADLTAIVTRDPAADGLLTPFLYFKGFHALQWHRVAHWLWAQGRRDL 120

Query: 129 AIFLQNQVSVSFQVDIHPAAKIGRGIMLDHATGIVVGETAVIEDDVSILQSVTLGGTGKT 188
             FLQ++VS  F VDIHPA  IGRG+++DH TG+V+GETAV+ DDVSILQ VTLGGTGK 
Sbjct: 121 PHFLQSRVSEVFAVDIHPAVSIGRGVLIDHGTGVVIGETAVVGDDVSILQGVTLGGTGKE 180

Query: 189 SGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPE 248
            GDRHPK+R+GV++ AGAK+LGNIEVGR AK+GAGSVVL+PVPP  T AGVPAR+VG   
Sbjct: 181 HGDRHPKVRDGVLLAAGAKVLGNIEVGRHAKVGAGSVVLKPVPPGATVAGVPARVVGWLT 240

Query: 249 SDK-PAMDMD 257
           S + PA++MD
Sbjct: 241 SGQAPAVEMD 250


Lambda     K      H
   0.319    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 297
Number of extensions: 8
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 260
Length adjustment: 25
Effective length of query: 248
Effective length of database: 235
Effective search space:    58280
Effective search space used:    58280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)

Align candidate AZOBR_RS25375 AZOBR_RS25375 (serine acetyltransferase)
to HMM TIGR01172 (cysE: serine O-acetyltransferase (EC 2.3.1.30))

Software error:

../bin/blast/fastacmd -i /tmp/list.19669.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.19669.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.