Align Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 (characterized)
to candidate AZOBR_RS31185 AZOBR_RS31185 ribose-phosphate pyrophosphokinase
Query= SwissProt::P0A1V6
(315 letters)
>FitnessBrowser__azobra:AZOBR_RS31185
Length = 311
Score = 323 bits (828), Expect = 3e-93
Identities = 167/312 (53%), Positives = 228/312 (73%), Gaps = 4/312 (1%)
Query: 4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPT 63
MK+ AGN+ LA+ I+ L L A++ RFSD EV V+I ENVRG D+F++QST P
Sbjct: 1 MKVLAGNSNRPLAEAISTCLGVPLTKASIRRFSDMEVFVEILENVRGEDVFVVQSTSFPA 60
Query: 64 NDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVD 123
NDNLMEL+V +DALRR SA RITAV+PY+GYARQDR+ R PI+AK+VA+ ++ G +
Sbjct: 61 NDNLMELLVTIDALRRGSARRITAVLPYYGYARQDRKT-GPRTPISAKLVANLITQAGAN 119
Query: 124 RVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQL--NLDNPIVVSPDIGGVVRARAIA 181
RVLT+DLHA QIQGFFD+P DN+ +P+ +D+ ++ +VSPD+GGVVRAR++A
Sbjct: 120 RVLTMDLHAGQIQGFFDIPTDNLMAAPVFEKDIRATFEDIGEVTMVSPDVGGVVRARSLA 179
Query: 182 KLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGA 241
K L D D+AIIDKRR RA VS+VM+IIGDV R C+L+DD++D+GGTLC AA AL + GA
Sbjct: 180 KRL-DADLAIIDKRRERAGVSEVMNIIGDVKNRRCILLDDIVDSGGTLCNAAVALMDAGA 238
Query: 242 KRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLTDEIKALPNVRTLTLSGMLAEAIR 301
K V AY TH + SG A + S ++++V D+I T+ ++ N+R LT++ +LA+AI
Sbjct: 239 KSVHAYCTHGVLSGGAVARVAVSPLEQLVTTDSIQATEAVRVSRNIRQLTIAPLLADAIT 298
Query: 302 RISNEESISAMF 313
RIS E S+S++F
Sbjct: 299 RISEERSVSSLF 310
Lambda K H
0.322 0.137 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 290
Number of extensions: 14
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 311
Length adjustment: 27
Effective length of query: 288
Effective length of database: 284
Effective search space: 81792
Effective search space used: 81792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)
Align candidate AZOBR_RS31185 AZOBR_RS31185 (ribose-phosphate pyrophosphokinase)
to HMM TIGR01251 (prs: ribose-phosphate diphosphokinase (EC 2.7.6.1))
../bin/blast/fastacmd -i /tmp/list.7346.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.7346.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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