Alignments for a candidate for metX in Pedobacter sp. GW460-11-11-14-LB5

Align Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 (characterized)
to candidate CA265_RS08175 CA265_RS08175 homoserine O-acetyltransferase

Query= SwissProt::K4ICC9
         (336 letters)



>FitnessBrowser__Pedo557:CA265_RS08175
          Length = 352

 Score =  375 bits (964), Expect = e-109
 Identities = 180/332 (54%), Positives = 239/332 (71%), Gaps = 1/332 (0%)

Query: 5   FKYQDPFQLENGEVLPELEVSYSTLGKLNKEKSNVIWVCHALTANAQPEDWWRGLIGNEK 64
           + Y   F+LE+G+ +  L+++Y T GKLN  K NVIWVCHALTANA   +WW GL G   
Sbjct: 7   YHYNKQFKLESGKKIRNLQIAYQTYGKLNANKDNVIWVCHALTANADVFEWWEGLFGQNS 66

Query: 65  GIDTEKYFIVCANIIGSCYGSTNPKSINPETGEVYGLNFPLFSIRDVTKSLELLSEALEI 124
             + E+++IVCAN++GS YGS+NP S NP TG  Y L+FP F+IRD+  + +LL+  L I
Sbjct: 67  LFNPEEHYIVCANVLGSHYGSSNPLSTNPVTGLPYYLSFPQFTIRDLVSAHQLLASHLGI 126

Query: 125 EHIQFLIGGSMGGMQAMEWAIEKPDKIKNLILLATNAKHSSWGIALNETQRMAIEADSTF 184
           ++I+ LIGGS+GG QA+EW+I +P+KI+NLIL+ATNA HS WGIA NE+QR+AI  D TF
Sbjct: 127 DYIKLLIGGSLGGQQAVEWSISEPNKIENLILIATNAAHSPWGIAFNESQRLAITTDRTF 186

Query: 185 YKKETNSGKKGLEAARAIALLSYRNYNTYRHTQVDQ-EHTADHFRASTYQKYQGEKLSKR 243
           Y  + N G KGL+ AR+IALLSYR Y+ Y  TQV+      D+FR+S+YQ YQGEKL  R
Sbjct: 187 YANQPNGGSKGLKTARSIALLSYRTYSAYGSTQVESVNDKTDNFRSSSYQNYQGEKLINR 246

Query: 244 FNAKCYWYLSKAMDSHNVGRNRGDCKKALAKIKAETLVIAVQSDLLFPVEEQRFLAQYIP 303
           FNA  Y+YL+KAMDSHNVGRNR     AL  I A TLVI +++D+LFP+ EQ++LA +IP
Sbjct: 247 FNAYSYYYLTKAMDSHNVGRNRKSIADALKLITANTLVIGIENDVLFPLSEQKYLADHIP 306

Query: 304 KGKLEIIDSIYGHDGFLIEVEKIKSLVHKHFK 335
             +   + S YGHDGFLIE + + +++    K
Sbjct: 307 GAEFSALHSDYGHDGFLIETDALTNVIGNFIK 338


Lambda     K      H
   0.317    0.134    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 376
Number of extensions: 17
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 352
Length adjustment: 29
Effective length of query: 307
Effective length of database: 323
Effective search space:    99161
Effective search space used:    99161
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)

Align candidate CA265_RS08175 CA265_RS08175 (homoserine O-acetyltransferase)
to HMM TIGR01392 (metX: homoserine O-acetyltransferase (EC 2.3.1.31))

Software error:

../bin/blast/fastacmd -i /tmp/list.24327.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.24327.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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