Align Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 (characterized)
to candidate CA265_RS15805 CA265_RS15805 acetolactate synthase, large subunit, biosynthetic type
Query= SwissProt::P0DP90
(548 letters)
>FitnessBrowser__Pedo557:CA265_RS15805
Length = 583
Score = 465 bits (1196), Expect = e-135
Identities = 249/556 (44%), Positives = 348/556 (62%), Gaps = 16/556 (2%)
Query: 3 GAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGG--VEHLLCRHEQGAAMAAIGYARA 60
G+Q +++ L +GV T+FGYPGGAIMP+YDALYD +EH+L RHEQG AA G+ARA
Sbjct: 26 GSQVLLNGLIEEGVTTIFGYPGGAIMPIYDALYDYADKLEHILVRHEQGGIHAAQGFARA 85
Query: 61 TGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLA 120
+G+ GV ATSGPGATNL+TGLADA +DS P+V ITGQV A +GTDAFQE DV+ ++
Sbjct: 86 SGEVGVVFATSGPGATNLVTGLADAQIDSTPLVCITGQVFAHLLGTDAFQETDVINITTP 145
Query: 121 CTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPKDIQLASGDLEPWFTTVENEVT 180
TK ++ V +E+ ++A+AF +A SGRPGPVL+DI K+ QL + +
Sbjct: 146 VTKWNYQVTDAKEIQEVLAKAFYIAKSGRPGPVLIDITKNAQLQLEEFPEYVKCNHIRSY 205
Query: 181 FPHAEV-----EQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKGLG 235
P +V EQA +++ A+KP + G GV + A + F+ T +PA T+ G G
Sbjct: 206 RPKPKVRIEYIEQAAELINSAKKPFVLFGQGVILGSAEEEFKAFINKTGIPAAWTIMGEG 265
Query: 236 AVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDI 295
A+ +P +GMLGMHG N E D++IA+G RFDDRVTG+L+ +A A V+H+DI
Sbjct: 266 AIPTSHPLNVGMLGMHGNYGPNVLTNEADVIIAIGMRFDDRVTGRLDKYAKQARVVHLDI 325
Query: 296 DPAEMNKLRQAHVALQGDLNALLPALQQPLNQYDWQQHCAQLRDEHSWRYDH-------- 347
DPAE++K +A V + GD LP L +N+ + A+ R + D
Sbjct: 326 DPAEIDKNVKAEVGVWGDCKETLPLLTNLVNENKHEDWLAKFRQYNQEEIDQVITPELYP 385
Query: 348 PGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPENFITSSGLGTMGFGL 407
GD + +L+ +++ D V+ TDVGQHQM A ++ + ITS GLGTMGFGL
Sbjct: 386 TGDEMTMGEVLRNINEICGGDAVIVTDVGQHQMVACRYAKFNNTRSNITSGGLGTMGFGL 445
Query: 408 PAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQL 467
PAA+GA+ P+ TV+ I GDG F M QELGT+ + +KI++L+N+ LGMVRQWQQL
Sbjct: 446 PAAIGAKYGAPDKTVIAIIGDGGFQMTPQELGTIMQFGAAVKILILNNRFLGMVRQWQQL 505
Query: 468 FFQERYSETTLTDNPDFLMLASAFGIHGQHITRKDQVEAALDTMLNSDGPYLLHVSIDEL 527
F +RYS +T +PDF+ LA ++ I + + + AL+TM+N +G YLL V +
Sbjct: 506 FHDKRYSFVNIT-SPDFVALAKSYYIEASKVDERANLRQALETMINHEGSYLLEVMVGRE 564
Query: 528 ENVWPLVPPGASNSEM 543
NV+P+VP G S SE+
Sbjct: 565 NNVFPMVPQGMSVSEI 580
Lambda K H
0.320 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 766
Number of extensions: 31
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 583
Length adjustment: 36
Effective length of query: 512
Effective length of database: 547
Effective search space: 280064
Effective search space used: 280064
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate CA265_RS15805 CA265_RS15805 (acetolactate synthase, large subunit, biosynthetic type)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.29904.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.29904.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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