Align amino-acid N-acetyltransferase (EC 2.3.1.1) (characterized)
to candidate GFF3372 HP15_3314 N-acetyllutamate synthase
Query= BRENDA::P22567 (432 letters) >FitnessBrowser__Marino:GFF3372 Length = 435 Score = 476 bits (1226), Expect = e-139 Identities = 234/431 (54%), Positives = 316/431 (73%), Gaps = 1/431 (0%) Query: 3 DYVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRP 62 D+++ RH+SPYIN+HR RT V+ +PG+ +EH NF NI+HD+ LL SLG RLV+ G+RP Sbjct: 5 DWLHGFRHSSPYINAHRGRTVVLTIPGDAIEHGNFINIIHDIALLSSLGVRLVVAFGARP 64 Query: 63 QIEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGARLR 122 QI+ RL A G+ + + LR+T L V++AVG LR +E+ LSM + SPM AR+R Sbjct: 65 QIQTRLDAAGIESSFSKGLRITPQEHLSMVMEAVGGLRAYLESHLSMGLVNSPMHNARIR 124 Query: 123 VAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYSPTGEIFNL 182 V+GGN V A+P+GV++G+D+ HTG+VRR+D GI +LL+ IVLL P+GYSPTG+ FNL Sbjct: 125 VSGGNYVAAKPVGVLDGIDFGHTGKVRRVDVAGIEKLLELGHIVLLPPMGYSPTGDAFNL 184 Query: 183 ACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHLQRLG-NSYQAELL 241 + EDV + A L+AEKL+++ + GL + G L+REL +Q L + A+LL Sbjct: 185 SYEDVGSQVAAALQAEKLMVFIDDPGLQEEDGTLIRELSARQASERLAAGAVTGHDADLL 244 Query: 242 DAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQLREAGIEDVGGLIE 301 AA AC GV+R+HI+SY +DGALL ELFTR G GTLV+ + +EQ R+A +ED+GG++E Sbjct: 245 RAACDACVKGVRRAHIISYVDDGALLKELFTRDGAGTLVSGDHYEQFRQARVEDIGGILE 304 Query: 302 LIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADSEAGELACLAVNPE 361 LI+PLEEQGILVRRSRE+LE EI++F + ER+G I+ CAALY + AGEL+C AV+P Sbjct: 305 LIQPLEEQGILVRRSREMLETEIDRFVVAERDGTIVGCAALYSYPEEGAGELSCFAVDPT 364 Query: 362 YRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYNF 421 YR GRGDE+L +E+ ARG G++ LFVLTT+T HWFRERGFQPS+V+ LP + + YN Sbjct: 365 YRRAGRGDEILAMVEKLARGQGIQKLFVLTTQTEHWFRERGFQPSTVQALPGPKLAAYNT 424 Query: 422 QRNSQVFEKSL 432 QRNS+VF K L Sbjct: 425 QRNSKVFFKPL 435 Lambda K H 0.321 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 558 Number of extensions: 23 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 432 Length of database: 435 Length adjustment: 32 Effective length of query: 400 Effective length of database: 403 Effective search space: 161200 Effective search space used: 161200 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 51 (24.3 bits)
Align candidate GFF3372 HP15_3314 (N-acetyllutamate synthase)
to HMM TIGR01890 (argA: amino-acid N-acetyltransferase (EC 2.3.1.1))
../bin/blast/fastacmd -i /tmp/list.26595.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.26595.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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