Align phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (characterized)
to candidate GFF363 PS417_01850 phosphoribosyl-ATP pyrophosphatase
Query= reanno::WCS417:GFF363
(110 letters)
>FitnessBrowser__WCS417:GFF363
Length = 110
Score = 218 bits (554), Expect = 2e-62
Identities = 110/110 (100%), Positives = 110/110 (100%)
Query: 1 MSDTLNRVAQVLEDRKGADADSSYVASLYHKGLNKILEKLGEESVETIIAAKDAQISGDC 60
MSDTLNRVAQVLEDRKGADADSSYVASLYHKGLNKILEKLGEESVETIIAAKDAQISGDC
Sbjct: 1 MSDTLNRVAQVLEDRKGADADSSYVASLYHKGLNKILEKLGEESVETIIAAKDAQISGDC 60
Query: 61 SDVIYETADLWFHSLVMLAQLGQHPQAVLDELDRRFGLSGHAEKASRPSA 110
SDVIYETADLWFHSLVMLAQLGQHPQAVLDELDRRFGLSGHAEKASRPSA
Sbjct: 61 SDVIYETADLWFHSLVMLAQLGQHPQAVLDELDRRFGLSGHAEKASRPSA 110
Lambda K H
0.314 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 136
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 110
Length adjustment: 12
Effective length of query: 98
Effective length of database: 98
Effective search space: 9604
Effective search space used: 9604
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 40 (20.0 bits)
Align candidate GFF363 PS417_01850 (phosphoribosyl-ATP pyrophosphatase)
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))
../bin/blast/fastacmd -i /tmp/list.21197.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.21197.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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