Align amino-acid N-acetyltransferase (EC 2.3.1.1) (characterized)
to candidate PP_5185 PP_5185 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase
Query= BRENDA::P22567 (432 letters) >FitnessBrowser__Putida:PP_5185 Length = 432 Score = 746 bits (1925), Expect = 0.0 Identities = 371/432 (85%), Positives = 401/432 (92%) Query: 1 MPDYVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGS 60 MPDYVNWLRHASPYIN+HRD TFVVMLPG+GVEHPNFGNIVHDLVLLHSLG RLVLVHGS Sbjct: 1 MPDYVNWLRHASPYINAHRDCTFVVMLPGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGS 60 Query: 61 RPQIEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGAR 120 RPQIE+RLA RGL P YHR +R+TDA TL+CVIDAVG+LR+AIEARLSMD+AASPMQG+R Sbjct: 61 RPQIESRLADRGLTPHYHRGMRITDAATLDCVIDAVGALRLAIEARLSMDIAASPMQGSR 120 Query: 121 LRVAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYSPTGEIF 180 LRVA GNLVTARPIGV+EGVDYHHTGEVRR+DRKGI RLLDERSIVLLSPLGYSPTGEIF Sbjct: 121 LRVASGNLVTARPIGVLEGVDYHHTGEVRRVDRKGISRLLDERSIVLLSPLGYSPTGEIF 180 Query: 181 NLACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHLQRLGNSYQAEL 240 NLACEDVA RAAI+L A+KL+L+GAE GLLDA G+LVRELRPQQV HLQRLG+ YQ EL Sbjct: 181 NLACEDVATRAAIELGADKLLLFGAEPGLLDADGRLVRELRPQQVAPHLQRLGSDYQGEL 240 Query: 241 LDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQLREAGIEDVGGLI 300 LDAAA+AC+ GV RSHIVSY EDGALL+ELFTR G GTLV+QEQFE +REA IEDVGGL+ Sbjct: 241 LDAAAEACKGGVARSHIVSYAEDGALLTELFTRGGGGTLVSQEQFEVVREATIEDVGGLL 300 Query: 301 ELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADSEAGELACLAVNP 360 ELI PLEEQGILVRRSREVLEREIEQFS+VEREG+IIACAALYPIADSEAGELACLAVNP Sbjct: 301 ELISPLEEQGILVRRSREVLEREIEQFSVVEREGMIIACAALYPIADSEAGELACLAVNP 360 Query: 361 EYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYN 420 EYRHGGRGDELLERIE RAR +GL TLFVLTTRTAHWFRERGF PS VERLPAARASLYN Sbjct: 361 EYRHGGRGDELLERIESRARQMGLSTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYN 420 Query: 421 FQRNSQVFEKSL 432 +QRNS++FEK L Sbjct: 421 YQRNSKIFEKPL 432 Lambda K H 0.321 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 727 Number of extensions: 15 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 432 Length of database: 432 Length adjustment: 32 Effective length of query: 400 Effective length of database: 400 Effective search space: 160000 Effective search space used: 160000 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 51 (24.3 bits)
Align candidate PP_5185 PP_5185 (acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase)
to HMM TIGR01890 (argA: amino-acid N-acetyltransferase (EC 2.3.1.1))
../bin/blast/fastacmd -i /tmp/list.10128.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.10128.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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