Align Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 (characterized)
to candidate WP_002719157.1 RSPH17029_RS03645 anthranilate synthase component I
Query= SwissProt::P20579 (493 letters) >NCBI__GCF_000015985.1:WP_002719157.1 Length = 503 Score = 444 bits (1142), Expect = e-129 Identities = 256/496 (51%), Positives = 324/496 (65%), Gaps = 30/496 (6%) Query: 4 EEFLRLAAVGYNRIPLACETLADFDTPLSIYLKLAD-QPNSYLLESVQGGEKWGRYSMIG 62 E F R G N+I A T AD DTP+S+ LKLA+ + ++++LESV GGE GRYS++G Sbjct: 8 ESFERGWKAGQNQIVYARLT-ADLDTPVSLMLKLAEARTDTFMLESVTGGEIRGRYSVVG 66 Query: 63 LPSRTVMRVHGYHVSILHDG-------VEVESHDVEDPLAFVESFKDRYKVADIPG-LPR 114 + + + HG I + +E H +E A + + ++P LP Sbjct: 67 MKPDLIWQCHGQDSRINREARFDRQAFQPLEGHPLETLRALIAESR-----IEMPADLPP 121 Query: 115 FNGGLVGYFGYDCVRYVEKRLGVSPNPDPLGVPDILLMVSDAVVVFDNLAGKMHAIVLVD 174 GL GY GYD +R VE G+ NPDPLG+PD +LM V V D + G+ + +V Sbjct: 122 IAAGLFGYLGYDMIRLVEHLPGI--NPDPLGLPDAVLMRPSVVAVLDGVKGE---VTVVA 176 Query: 175 PA-------EEQAFEQGQARLQGLLETLRQPITPRRGLDLSGPQAAEPEFRSSYTREDYE 227 PA A+ Q R+ L L + +R G A E RS++T E Y+ Sbjct: 177 PAWVSSGLSARAAYAQAAERVMDALRDLDRAPPAQRDF---GEVAQVGEMRSNFTHEGYK 233 Query: 228 NAVGRIKEYILAGDCMQVVPSQRMSIDFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVG 287 AV + K+YI AGD QVVPSQR + DF+ P LYR+LR NP+P+M+FFNFG F VVG Sbjct: 234 AAVEKAKDYIRAGDIFQVVPSQRWAQDFRLPPFALYRSLRKTNPSPFMFFFNFGGFQVVG 293 Query: 288 SSPEVLVRVEDNLVTVRPIAGTRPRGATEEADRALEDDLLSDDKEIAEHLMLIDLGRNDV 347 +SPE+LVR+ D VTVRPIAGTR RGAT E DRALE DLLSD KE+AEHLML+DLGRNDV Sbjct: 294 ASPEILVRLRDREVTVRPIAGTRKRGATPEEDRALEADLLSDKKELAEHLMLLDLGRNDV 353 Query: 348 GRVSSTGSVRLTEKMVIERYSNVMHIVSNVAGQLREGLTAMDALRAILPAGTLSGAPKIR 407 GRV+ G+VR TEK +IERYS+VMHIVSNV G++ EG A+ AL A LPAGT+SGAPK+R Sbjct: 354 GRVAKIGTVRPTEKFIIERYSHVMHIVSNVVGEIAEGEDALSALLAGLPAGTVSGAPKVR 413 Query: 408 AMEIIDELEPVKRGVYGGAVGYFAWNGNMDTAIAIRTAVINDGELHVQAGGGIVADSVPA 467 AMEIIDELEP KRGVYGG VGYFA NG MD IA+RTAV+ D L++Q+GGG+V DS P Sbjct: 414 AMEIIDELEPEKRGVYGGGVGYFAANGEMDFCIALRTAVLKDETLYIQSGGGVVYDSDPE 473 Query: 468 LEWEETINKRRAMFRA 483 E++ET+NK RA+ RA Sbjct: 474 AEYQETVNKARALRRA 489 Lambda K H 0.320 0.138 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 675 Number of extensions: 30 Number of successful extensions: 5 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 493 Length of database: 503 Length adjustment: 34 Effective length of query: 459 Effective length of database: 469 Effective search space: 215271 Effective search space used: 215271 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 52 (24.6 bits)
Align candidate WP_002719157.1 RSPH17029_RS03645 (anthranilate synthase component I)
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))
../bin/blast/fastacmd -i /tmp/list.1031.in -d ../tmp/NCBI__GCF_000015985.1/orgs.faa -p T > /tmp/gapView.1031.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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