Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_004300548.1 C665_RS03825 acetolactate synthase 3 catalytic subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_000310185.1:WP_004300548.1
Length = 570
Score = 838 bits (2164), Expect = 0.0
Identities = 402/566 (71%), Positives = 475/566 (83%), Gaps = 1/566 (0%)
Query: 21 GAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYARAT 80
GAEI++ L EE VEYV+GYPGGAVL++YD L +Q H+LVRHEQAAVHAADG+AR+T
Sbjct: 5 GAEIVIRCLQEEKVEYVFGYPGGAVLFLYDALFQQETVRHVLVRHEQAAVHAADGFARST 64
Query: 81 GKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGITRPI 140
KVGVALVTSGPG TNAVTGIATAY DSIPMV+I+G VP AIGQDAFQE DTVGITRP
Sbjct: 65 EKVGVALVTSGPGATNAVTGIATAYCDSIPMVIISGQVPVAAIGQDAFQEVDTVGITRPC 124
Query: 141 VKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRSYNP 200
VKHNFLV+DVRD+AAT+KKAF +A TGRPGPV+VDIPKDVS C+YEYPK I MRSYNP
Sbjct: 125 VKHNFLVRDVRDIAATMKKAFHLARTGRPGPVLVDIPKDVSMQRCEYEYPKEISMRSYNP 184
Query: 201 VNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLMGLGAF 260
V KGHSGQI+KAV LL A+RP IYTGGGVVL+NA+++L +L L G+P+TNTLMGLG +
Sbjct: 185 VTKGHSGQIKKAVQLLLEAKRPMIYTGGGVVLSNAAEQLVKLTRLLGYPITNTLMGLGGY 244
Query: 261 PGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKIIHIDID 320
P + +QF+GM GMHGT+EANMAM DVL+A+GARFDDRVIGNPAHF + RKIIH+DID
Sbjct: 245 PSSDRQFLGMPGMHGTFEANMAMHYSDVLLAVGARFDDRVIGNPAHFAEEPRKIIHVDID 304
Query: 321 PSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIEQWRSVDCLKYD 380
PSSISKRV+VD PIVG+VK+VL E+I QI++ + +P EALA WW+QIEQWR C+ Y
Sbjct: 305 PSSISKRVRVDTPIVGDVKEVLDEMIRQIESGEARPNPEALASWWKQIEQWRERKCMVYK 364
Query: 381 RSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWINSGGLGTMGVG 440
S EIIKPQ+V++K+WE+T GDA + SDVGQHQMWAAQ+Y FD+PRRW+NSGGLGTMGVG
Sbjct: 365 NSDEIIKPQFVIQKLWEVTGGDAIVTSDVGQHQMWAAQYYGFDKPRRWLNSGGLGTMGVG 424
Query: 441 LPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLGMVRQWQE 500
+PYAMG K A P+ +V +TGE SIQM IQELSTC Q+ P+KIC+LNN YLGMVRQWQE
Sbjct: 425 MPYAMGAKLANPDMQVACVTGEASIQMNIQELSTCKQFRLPIKICNLNNRYLGMVRQWQE 484
Query: 501 IEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRL-KDRTVFLDFQT 559
+ + RYS SYMD+LPDF KLAE+YGHVG+RV++ +DVE ALREAF KD VFLDFQ
Sbjct: 485 LFHGGRYSESYMDSLPDFAKLAESYGHVGIRVDRPADVEGALREAFTTHKDELVFLDFQI 544
Query: 560 DPTENVWPMVQAGKGISEMLLGAEDL 585
D TENV+PMVQ GKG++EM+L AEDL
Sbjct: 545 DQTENVYPMVQGGKGLTEMILSAEDL 570
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1071
Number of extensions: 33
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 570
Length adjustment: 36
Effective length of query: 549
Effective length of database: 534
Effective search space: 293166
Effective search space used: 293166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_004300548.1 C665_RS03825 (acetolactate synthase 3 catalytic subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.7930.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.7930.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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