Align acetylglutamate kinase (EC 2.7.2.8) (characterized)
to candidate WP_004302479.1 C665_RS05725 acetylglutamate kinase
Query= BRENDA::Q9HTN2 (301 letters) >NCBI__GCF_000310185.1:WP_004302479.1 Length = 300 Score = 373 bits (958), Expect = e-108 Identities = 189/291 (64%), Positives = 235/291 (80%), Gaps = 4/291 (1%) Query: 9 AQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGG 68 A+ A++L+EALPYI+RF KT+VIKYGGNAM LK FARDVVL+K VG+NPVVVHGG Sbjct: 13 ARKAEILAEALPYIKRFFDKTIVIKYGGNAMTDPHLKDCFARDVVLLKLVGLNPVVVHGG 72 Query: 69 GPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTG 128 GPQI +LL R+ + FI GMRVTDA TM+VVEMVLGGQVNK+IVNLIN+HGG A+GLTG Sbjct: 73 GPQIENLLTRMGKKGEFIQGMRVTDAETMEVVEMVLGGQVNKEIVNLINKHGGKAVGLTG 132 Query: 129 KDAELIRAKKLTVTRQ-TPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGV 187 KDA IRAKKL + + PE ++ID+G VGE+TG++ L++ L +GDFIPVIAPIGV Sbjct: 133 KDAGFIRAKKLLMQKHGAPE---GDLIDVGQVGEITGIDPSLISFLDQGDFIPVIAPIGV 189 Query: 188 GSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGT 247 G GE+YNINAD+VAGK+AE LKAEKL+LLTN G++DK G +LTGL+ Q+++L+ADGT Sbjct: 190 GEEGETYNINADVVAGKLAEILKAEKLVLLTNTPGVLDKAGNLLTGLTPRQIDDLVADGT 249 Query: 248 IYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 298 + GGMLPKI AL+A + GV S HIIDGRV + +LLEI TD GVGT+I ++ Sbjct: 250 LSGGMLPKIGSALDAARNGVKSVHIIDGRVEHCLLLEILTDHGVGTMIKSK 300 Lambda K H 0.318 0.138 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 379 Number of extensions: 20 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 301 Length of database: 300 Length adjustment: 27 Effective length of query: 274 Effective length of database: 273 Effective search space: 74802 Effective search space used: 74802 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 48 (23.1 bits)
Align candidate WP_004302479.1 C665_RS05725 (acetylglutamate kinase)
to HMM TIGR00761 (argB: acetylglutamate kinase (EC 2.7.2.8))
../bin/blast/fastacmd -i /tmp/list.16284.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.16284.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.