Alignments for a candidate for trpD_1 in Thauera aminoaromatica S2

Align anthranilate synthase (subunit 2/2) (EC 4.1.3.27) (characterized)
to candidate WP_004322779.1 C665_RS16200 aminodeoxychorismate/anthranilate synthase component II

Query= BRENDA::P20576
         (201 letters)



>NCBI__GCF_000310185.1:WP_004322779.1
          Length = 195

 Score =  292 bits (748), Expect = 2e-84
 Identities = 142/190 (74%), Positives = 165/190 (86%), Gaps = 5/190 (2%)

Query: 1   MLLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAG 60
           MLLMIDNYDSFTYNLVQYFGEL A+VKV RNDE+++EQI  LAPE +V+SPGPC+P +AG
Sbjct: 1   MLLMIDNYDSFTYNLVQYFGELGAKVKVYRNDEITLEQIGRLAPEHLVISPGPCSPAQAG 60

Query: 61  VSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHGKTSPIHHKDLGVFAGLAN 120
           +S+A I+ FAGKLP+LGVCLGHQSIG+AFGG VV A+++MHGKTSP+HH D GVF GL N
Sbjct: 61  ISVAAIKAFAGKLPILGVCLGHQSIGEAFGGRVVHAKRLMHGKTSPVHHIDQGVFRGLPN 120

Query: 121 PLTVTRYHSLVVKRESLPECLEVTAWTQHADGSLDEIMGVRHKTLNVEGVQFHPESILTE 180
           PLT TRYHSL ++R SLP+CLEVTAWT+  DG   EIMGVRH+TL+VEGVQFHPESILTE
Sbjct: 121 PLTCTRYHSLAIERASLPDCLEVTAWTE--DG---EIMGVRHRTLDVEGVQFHPESILTE 175

Query: 181 QGHELLANFL 190
            GH LL NFL
Sbjct: 176 CGHALLKNFL 185


Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 203
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 195
Length adjustment: 20
Effective length of query: 181
Effective length of database: 175
Effective search space:    31675
Effective search space used:    31675
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)

Align candidate WP_004322779.1 C665_RS16200 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.24975.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.24975.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.