Alignments for a candidate for trpE in Thauera aminoaromatica S2

Align anthranilate synthase (subunit 1/2) (EC 4.1.3.27) (characterized)
to candidate WP_004322780.1 C665_RS16205 anthranilate synthase component I

Query= BRENDA::P20580
         (492 letters)



>NCBI__GCF_000310185.1:WP_004322780.1
          Length = 490

 Score =  565 bits (1456), Expect = e-165
 Identities = 294/492 (59%), Positives = 360/492 (73%), Gaps = 5/492 (1%)

Query: 1   MNREEFLRLAADGYNRIPLSFETLADFDTPLSIYLKLADAPNSYLLESVQGGEKWGRYSI 60
           M   EF  LAA+GYNRIPL+ ET AD DTPLSIYLKLA+ P +YLLESVQGGE++GRYS 
Sbjct: 1   MLEHEFNALAAEGYNRIPLTLETFADLDTPLSIYLKLANEPYTYLLESVQGGERFGRYSF 60

Query: 61  IGLPCRTVLRVYDHQVRISIDGVETERFDCADPLAFVEEFKARYQVPTVPGLPRFDGGLV 120
           IGL   T + VY     +       ER D  DPL FV EF  R +VP    LPRF GGLV
Sbjct: 61  IGLSSPTRIEVYGRSALLLTGNRLVERRDYGDPLNFVAEFMNRIKVPPRQHLPRFAGGLV 120

Query: 121 GYFGYDCVRYVEKRLATCPNPDPLGNPDILLMVSDAVVVFDNLAGKIHAIVLADPSEENA 180
           G FGYD VRY+E RLA     D +G PDILL++S+ V + DNL+GK+  +V A+P    A
Sbjct: 121 GCFGYDTVRYIEPRLAKTEKADTVGTPDILLLLSEEVAIVDNLSGKLTLVVYAEPEVPGA 180

Query: 181 YERGQARLEELLERLRQPITPRRGLDLEAAQGREPAFRASFTREDYENAVGRIKDYILAG 240
           Y+R Q RL ELL RLR+ +        E+A   EP   +SF  E +++AV R K YI+ G
Sbjct: 181 YKRAQRRLRELLARLREAVAIPEEFRGESA---EPV--SSFGEEAFKDAVRRAKQYIVDG 235

Query: 241 DCMQVVPSQRMSIEFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDGL 300
           D MQVV SQRMS  + A+P+ LYRA+R  NP+PY+++FN  DFHVVG+SPE+L R+ED +
Sbjct: 236 DLMQVVLSQRMSKPYAASPMALYRAIRSLNPSPYLFYFNLEDFHVVGASPEILTRLEDDV 295

Query: 301 VTVRPIAGTRPRGINEEADLALEQDLLSDAKEIAEHLMLIDLGRNDVGRVSDIGAVKVTE 360
           VTVRPIAGTR RG     DLALEQ+LL+D KEIAEH+ L+DLGRND GRVS++G V+VTE
Sbjct: 296 VTVRPIAGTRKRGATPAEDLALEQELLADQKEIAEHVQLLDLGRNDAGRVSEVGTVRVTE 355

Query: 361 KMVIERYSNVMHIVSNVTGQLREGLSAMDALRAILPAGTLSGAPKIRAMEIIDELEPVKR 420
           +  +ERYS+VMHIVSNV G+LREGL A+  LRA  PAGT+SGAPK+RAMEIIDELEPVKR
Sbjct: 356 RFTVERYSHVMHIVSNVEGKLREGLDALAVLRATFPAGTVSGAPKVRAMEIIDELEPVKR 415

Query: 421 GVYGGAVGYLAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKRRAM 480
           G+Y GAVGYL ++G+MD AIAIRTAV+K+G++HVQAG GIVADS P  EW ET +K RAM
Sbjct: 416 GIYAGAVGYLGFHGDMDLAIAIRTAVVKDGQIHVQAGAGIVADSDPDAEWNETQSKARAM 475

Query: 481 FRAVALAEQSVE 492
            RA  +AE  ++
Sbjct: 476 LRAAEMAEGGLD 487


Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 693
Number of extensions: 35
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 490
Length adjustment: 34
Effective length of query: 458
Effective length of database: 456
Effective search space:   208848
Effective search space used:   208848
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)

Align candidate WP_004322780.1 C665_RS16205 (anthranilate synthase component I)
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))

Software error:

../bin/blast/fastacmd -i /tmp/list.23974.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.23974.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.