Alignments for a candidate for ilvI in Anaerobutyricum hallii DSM 3353

Align acetohydroxy-acid synthase large subunit (EC 2.2.1.6) (characterized)
to candidate WP_005347643.1 EUBHAL_RS07895 biosynthetic-type acetolactate synthase large subunit

Query= metacyc::MONOMER-11900
         (599 letters)



>NCBI__GCF_000173975.1:WP_005347643.1
          Length = 577

 Score =  467 bits (1201), Expect = e-136
 Identities = 255/594 (42%), Positives = 358/594 (60%), Gaps = 44/594 (7%)

Query: 1   MNGAEAMIKALEAEKVEILFGYPGGALLPFYDALHHSDLIHL-LTRHEQAAAHAADGYAR 59
           ++G +  + A++ E V+ +F YPGG ++   DALH    I L L RHEQ   HAADGYAR
Sbjct: 3   VSGNDLFVTAMKKEGVDTIFAYPGGMVVNLLDALHDCHGIDLVLPRHEQGLIHAADGYAR 62

Query: 60  ASGKVGVCIGTSGPGATNLVTGVATAHSDSSPMVALTGQVPTKLIGNDAFQEIDALGLFM 119
           A+GKVGVC+ TSGPGATNLVTG+ATA+ DS P+V  TGQVP  LIGNDAFQE+D +G+  
Sbjct: 63  ATGKVGVCLVTSGPGATNLVTGIATANYDSIPLVCFTGQVPEHLIGNDAFQEVDIIGVTR 122

Query: 120 PIVKHNFQIQKTCQIPEIFRSAFEIAQTGRPGPVHIDLPKDVQELELDIDKHPIPSKVKL 179
            I K    ++    + +  + AF IA++G+PGPV +DLP DV     ++     P++V +
Sbjct: 123 NIAKFVIMVRDREMLAQRIKEAFYIARSGKPGPVLVDLPTDVMA---ELGSTSYPTEVNI 179

Query: 180 IGYNPTTIGHPRQIKKAIKLIASAKRPIILAGGGVLLSGANEELLKLVELLNIPVCTTLM 239
            GY P    H  Q+KKAI L+  AK+P+ L GGGV L+ A EE+ KL E ++ PV TT+M
Sbjct: 180 RGYKPNKGVHVGQLKKAINLLEEAKKPMFLIGGGVNLAHAQEEMTKLAEKIDAPVITTVM 239

Query: 240 GKGCISENHPLALGMVGMHGTKPANYCLSESDVLISIGCRFSDRITGDIKSFATNAKIIH 299
           G+G IS  HPL +G +GMHG+  AN    E D++ SIGCRF+DR+TG+IK FA NAKI+H
Sbjct: 240 GRGAISTEHPLYIGNIGMHGSYAANKTADECDLMFSIGCRFNDRVTGEIKKFAPNAKIVH 299

Query: 300 IDIDPAEIGKNVNVDVPIVGDAKLILKEVIKQLDYIINKDSKENNDKENISQWIENVNSL 359
           IDI+ A I +NV VD+PIV DAK  + +++            E+ +     +WI  V   
Sbjct: 300 IDIESAAISRNVTVDIPIVADAKAAILKIL------------EHTEPMKHEEWIAEVKGW 347

Query: 360 KKSSIPVMDYDDIPIKPQKIVKELMAVIDDLNINKNTIITTDVGQNQMWMAHYFKTQTPR 419
            K     M+ ++  + PQ+I++ L  V  D    ++T+ T+DVGQ+QMW + Y K     
Sbjct: 348 DKEYPLHMEVEE-GVNPQRIIETLNEVYAD----RDTVFTSDVGQHQMWASQYLKLDATH 402

Query: 420 SFLSSGGLGTMGFGFPSAIGAKVAKPDSKVICITGDGGFMMNCQELGTIAEYNIPVVICI 479
             + SGGLGTMGFG PSA+GA++  P+  V+ I+GDGGF MN QEL T     +P+V  +
Sbjct: 403 RLVQSGGLGTMGFGLPSAVGAQIGCPEKSVVSISGDGGFQMNMQELATAVCQELPLVNIV 462

Query: 480 FDNRTLGMVYQWQNLFYGKR----------QCSVNFGG--------APDFIKLAESYGIK 521
           F+N  LGMV Q Q LF+ KR           C    G          PDF+K+AE+YG K
Sbjct: 463 FNNNRLGMVRQMQELFFKKRYTITCLRYHKSCKGKCGTPGWVCPEYVPDFVKMAEAYGSK 522

Query: 522 ARRIESPNEINEALKEAINCDE----PYLLDFAIDPSS-ALSMVPPGAKLTNII 570
              + S +++ + + EA    E    P +++  + P    + M+  GA   +I+
Sbjct: 523 GYFVTSNDQLKDTILEAREYAEKNKKPVIVECMVAPDELVMPMIKGGASFEDIM 576


Lambda     K      H
   0.319    0.137    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 888
Number of extensions: 38
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 577
Length adjustment: 37
Effective length of query: 562
Effective length of database: 540
Effective search space:   303480
Effective search space used:   303480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)

Align candidate WP_005347643.1 EUBHAL_RS07895 (biosynthetic-type acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))

Software error:

../bin/blast/fastacmd -i /tmp/list.24672.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.24672.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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