Alignments for a candidate for ilvI in Anaerobutyricum hallii DSM 3353

Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_005351054.1 EUBHAL_RS13310 biosynthetic-type acetolactate synthase large subunit

Query= metacyc::MONOMER-18810
         (585 letters)



>NCBI__GCF_000173975.1:WP_005351054.1
          Length = 567

 Score =  494 bits (1271), Expect = e-144
 Identities = 269/567 (47%), Positives = 373/567 (65%), Gaps = 17/567 (2%)

Query: 21  GAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQT-KFEHILVRHEQAAVHAADGYARA 79
           G+EI++  L E+GV+ V+GYPGGA+L IYDEL+KQ+ K  H+L  HEQ A HAADGYARA
Sbjct: 7   GSEIVLECLKEQGVDTVFGYPGGAILNIYDELYKQSDKIHHVLTSHEQGASHAADGYARA 66

Query: 80  TGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGITRP 139
           TGKVGV + TSGPG TN VTG+ATAY+DSIP+V IT NV    +G+D+FQE D  G+T P
Sbjct: 67  TGKVGVCMATSGPGATNLVTGLATAYMDSIPVVAITANVGVSLLGKDSFQEIDIKGVTMP 126

Query: 140 IVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRSYN 199
           + KHN++VKD+  LA TI++AF IA +GR GPV+VDI KDV+  A K  Y +S++    +
Sbjct: 127 VTKHNYIVKDIEKLADTIREAFQIAQSGRKGPVLVDITKDVT--AAK-TYFESMEPAVIH 183

Query: 200 PVNKG-HSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLMGLG 258
           PV +      +++A+ +++ A++PY+  GGG  L++AS+++R+       PV +TLMG G
Sbjct: 184 PVCETIKEKSVKEAIEMIEEAKQPYVLLGGGCTLSDASEQVREFVKKIDAPVCDTLMGKG 243

Query: 259 AFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKIIHID 318
            FPG    + GMLGMHGT  +N+ +   D+LIAIG RF DRV GN   F S+A KII ID
Sbjct: 244 VFPGEDPAYTGMLGMHGTKTSNIGVSQSDLLIAIGTRFSDRVYGNAKTFASRA-KIIQID 302

Query: 319 IDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIEQWRSVDCLK 378
           IDP+ ++K + +D  I+G+VK VL  L  ++     + + EA   W ++I+  ++   + 
Sbjct: 303 IDPAEVNKNILIDTAIIGDVKAVLTILNRRLS----QQQHEA---WMQEIQDMKAKYPMT 355

Query: 379 YDRSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWINSGGLGTMG 438
           Y +  E +    ++EKI+ELT+GDA I ++VGQHQMWAAQ+YK++ PR+++ SGGLGTMG
Sbjct: 356 YHQ--ERLSGPGLIEKIYELTEGDAIITTEVGQHQMWAAQYYKYERPRQFLTSGGLGTMG 413

Query: 439 VGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLGMVRQW 498
            GL  A+G K   P+K VV I G+G  +M + E++T  + + PV    +NN  LGMVRQW
Sbjct: 414 YGLGAAIGAKCGCPDKVVVNIAGDGCFRMNMNEIATATRSEIPVIEVVVNNHVLGMVRQW 473

Query: 499 QEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLKDRTVFLDFQ 558
           Q + Y  RYS + +    DFVKLAEA G    RVE   + E A +EA    +    LD  
Sbjct: 474 QNLFYGERYSSTTLYDKVDFVKLAEAMGAKAKRVETIEEFEAAFKEAV-ASNEPYLLDCI 532

Query: 559 TDPTENVWPMVQAGKGISEMLLGAEDL 585
            D  + VWPMV  G  IS+     EDL
Sbjct: 533 IDSDDKVWPMVAPGGSISD-AFNEEDL 558


Lambda     K      H
   0.319    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 842
Number of extensions: 32
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 567
Length adjustment: 36
Effective length of query: 549
Effective length of database: 531
Effective search space:   291519
Effective search space used:   291519
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)

Align candidate WP_005351054.1 EUBHAL_RS13310 (biosynthetic-type acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))

Software error:

../bin/blast/fastacmd -i /tmp/list.24026.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.24026.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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