Alignments for a candidate for ilvC in Saccharomonospora cyanea NA-134

Align ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) (characterized)
to candidate WP_005454223.1 SACCYDRAFT_RS05085 ketol-acid reductoisomerase

Query= BRENDA::D6ERQ9
         (332 letters)



>NCBI__GCF_000244975.1:WP_005454223.1
          Length = 337

 Score =  488 bits (1255), Expect = e-142
 Identities = 239/327 (73%), Positives = 273/327 (83%)

Query: 3   ELFYDADADLSIIQGRKVAVIGYGSQGHAHALSLRDSGVDVRVGLHEGSKSKAKAEEQGL 62
           E+FYDADADL I+QGRKVAVIGYGSQGHAHALSLRDSGVDVR+GL EGSKS+AKAE++GL
Sbjct: 4   EIFYDADADLGIVQGRKVAVIGYGSQGHAHALSLRDSGVDVRIGLPEGSKSRAKAEDEGL 63

Query: 63  RVVPVAEAAAEADVIMILVPDPIQAEVYEKDIKDNLKDGDALFFGHGLNIRYGFIKPPAG 122
           RV+  AEAAAEAD+IMIL PD  Q  +YE+DI  NLKDGDALFFGHG NIRYG IKPPA 
Sbjct: 64  RVLTTAEAAAEADLIMILTPDTKQRAIYEQDIAPNLKDGDALFFGHGFNIRYGLIKPPAN 123

Query: 123 VDVCMVAPKGPGHLVRRQYEEGRGVPCIAAVEQDATGNAFALALSYAKGIGGTRAGVIKT 182
           VDV MVAPKGPGHLVRRQ+ +G+GVPC+ AVEQD +GNA ALALSYA  IGG RAGVIKT
Sbjct: 124 VDVAMVAPKGPGHLVRRQFVDGKGVPCLIAVEQDPSGNAQALALSYAAAIGGARAGVIKT 183

Query: 183 TFTEETETDLFGEQAVLCGGTAALVKAGFETLTEAGYQPEIAYFECLHELKLIVDLMYEG 242
           TFTEETETDLFGEQAVLCGG +ALV+ GFE LTEAGY PEIAYFE LHELKLIVDLMYEG
Sbjct: 184 TFTEETETDLFGEQAVLCGGASALVQTGFEVLTEAGYAPEIAYFEVLHELKLIVDLMYEG 243

Query: 243 GLEKMRWSISETAEWGDYVTGPRIITDATKAEMKKVLAEIQDGTFAKNWMDEYHGGLKKY 302
           G+ +MR+SIS+TAE+GD   GPR+IT   K  MK +L EIQDGTFA+ W+ E   G   +
Sbjct: 244 GIARMRYSISDTAEYGDLTRGPRVITPEVKENMKAILREIQDGTFAREWVTEDEQGRPNF 303

Query: 303 NEYKKQDSEHLLETTGKELRKLMSWVD 329
            + ++   +H +E TG++LR LMSWVD
Sbjct: 304 GKLQQAGEQHSIEETGRKLRGLMSWVD 330


Lambda     K      H
   0.316    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 427
Number of extensions: 13
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 337
Length adjustment: 28
Effective length of query: 304
Effective length of database: 309
Effective search space:    93936
Effective search space used:    93936
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)

Align candidate WP_005454223.1 SACCYDRAFT_RS05085 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))

Software error:

../bin/blast/fastacmd -i /tmp/list.21201.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.21201.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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