Align ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) (characterized)
to candidate WP_009546873.1 CCE_RS10055 ketol-acid reductoisomerase
Query= BRENDA::C8WR67
(344 letters)
>NCBI__GCF_000017845.1:WP_009546873.1
Length = 331
Score = 447 bits (1150), Expect = e-130
Identities = 223/331 (67%), Positives = 267/331 (80%), Gaps = 1/331 (0%)
Query: 1 MEKIYYDADISIQPLADKRIAVIGYGSQGHAHAQNLRDSGFDVVIGLRPGS-SWAKAEAD 59
M ++YYDAD ++ LADK +A+IGYGSQGHAHA NL+DSG +VV+GL PGS S KAE
Sbjct: 1 MARMYYDADANLDLLADKTVAIIGYGSQGHAHALNLKDSGINVVVGLYPGSKSRQKAEDA 60
Query: 60 GFRVMAVGEAVEESDVIMILLPDERQPAVYEREIRPYLTAGKALAFAHGFNIHFSQIQPP 119
G +VM V +A +D IMILLPDE Q AVY+ +I P L GK L+FAHGFNIHF QI PP
Sbjct: 61 GLKVMNVADAASAADWIMILLPDEVQKAVYQEDIEPNLREGKVLSFAHGFNIHFGQIVPP 120
Query: 120 KDVDVFMVAPKGPGHLVRRVYEAGGGVPALIAVHQDASGQAKDLALAYARGIGAGRAGIL 179
+ VDV MVAPKGPGHLVRR YE G GVP L AV+QDASGQA+D A+AYA+GIG RAGIL
Sbjct: 121 ETVDVIMVAPKGPGHLVRRTYEQGEGVPCLFAVYQDASGQARDRAMAYAKGIGGTRAGIL 180
Query: 180 TTTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPEIAYFECLHEMKLIVDLIY 239
T+FREETETDLFGEQ VLCGGLSALIK+GFETLV AGYQPE+AYFECLHE+KLIVDLI
Sbjct: 181 ETSFREETETDLFGEQVVLCGGLSALIKSGFETLVAAGYQPELAYFECLHEVKLIVDLIV 240
Query: 240 EGGLEYMRYSISDTAQWGDFTSGPRIINEETKKEMRRILADIQSGAFAKSWILENQANRP 299
EGGL MR SIS+TA++GD T GPRI+ +ET+ EM++IL +IQSG FA+ ++LENQ+ +P
Sbjct: 241 EGGLAKMRDSISNTAEYGDLTRGPRIVTDETRAEMKQILREIQSGQFAREFVLENQSGKP 300
Query: 300 MFNAINRRELEHPIEVVGRKLRSMMPFIKAK 330
F A+ R+E EHPIE VG+ LR+M ++K K
Sbjct: 301 GFTAMRRQEAEHPIEEVGKDLRAMFSWLKDK 331
Lambda K H
0.320 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 387
Number of extensions: 13
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 331
Length adjustment: 28
Effective length of query: 316
Effective length of database: 303
Effective search space: 95748
Effective search space used: 95748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)
Align candidate WP_009546873.1 CCE_RS10055 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.14101.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.14101.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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