Align phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (characterized)
to candidate WP_011021409.1 MA_RS07215 phosphoribosyl-ATP diphosphatase
Query= reanno::Putida:PP_5015
(111 letters)
>NCBI__GCF_000007345.1:WP_011021409.1
Length = 104
Score = 72.4 bits (176), Expect = 1e-18
Identities = 43/105 (40%), Positives = 68/105 (64%), Gaps = 12/105 (11%)
Query: 5 LNRLAEVLEERKQAAPDSSYVASL--YHKGLNKILEKLGEESVETIIAAKDAQISKDYSD 62
LNR+ +++ +RK+ ++SYV L + KG+NKILEK+GEES+ETI+A + ++D+ +
Sbjct: 9 LNRVYDIILDRKENYDENSYVCKLLNHRKGMNKILEKVGEESIETILAVR----NEDHKE 64
Query: 63 VIYETADLWFHSLVMLSALGQHPQAVLDELERRFGLSGHDEKAAR 107
++ E++DL FH LV+L+A LDE+ LS EK R
Sbjct: 65 IVSESSDLIFHLLVLLAA----NNVTLDEIAGE--LSARHEKMKR 103
Lambda K H
0.312 0.128 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 111
Length of database: 104
Length adjustment: 12
Effective length of query: 99
Effective length of database: 92
Effective search space: 9108
Effective search space used: 9108
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.0 bits)
S2: 40 (20.0 bits)
Align candidate WP_011021409.1 MA_RS07215 (phosphoribosyl-ATP diphosphatase)
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))
../bin/blast/fastacmd -i /tmp/list.31037.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.31037.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.