GapMind for Amino acid biosynthesis

 

Protein WP_011155798.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011155798.1

Length: 344 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 4 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
chorismate biosynthesis asd hi Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized) 49% 98% 315.8 USG-1 protein 35% 206.1
chorismate biosynthesis asd hi asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (TIGR01296) 100% 475.2 USG-1 protein 35% 206.1
L-lysine biosynthesis asd hi Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized) 49% 98% 315.8 USG-1 protein 35% 206.1
L-lysine biosynthesis asd hi asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (TIGR01296) 100% 475.2 USG-1 protein 35% 206.1
L-methionine biosynthesis asd hi Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized) 49% 98% 315.8 USG-1 protein 35% 206.1
L-methionine biosynthesis asd hi asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (TIGR01296) 100% 475.2 USG-1 protein 35% 206.1
L-threonine biosynthesis asd hi Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized) 49% 98% 315.8 USG-1 protein 35% 206.1
L-threonine biosynthesis asd hi asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (TIGR01296) 100% 475.2 USG-1 protein 35% 206.1

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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