GapMind for catabolism of small carbon sources

 

Protein WP_011155990.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011155990.1

Length: 333 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 9 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-arabinose catabolism gyaR hi Glyoxylate reductase; EC 1.1.1.26 (characterized) 42% 98% 244.2 hydroxypyruvate reductase subunit (EC 1.1.1.81) 34% 193.7
D-xylose catabolism gyaR hi Glyoxylate reductase; EC 1.1.1.26 (characterized) 42% 98% 244.2 hydroxypyruvate reductase subunit (EC 1.1.1.81) 34% 193.7
D-cellobiose catabolism kguD lo 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) (characterized) 37% 95% 169.5 Glyoxylate reductase; EC 1.1.1.26 42% 244.2
D-gluconate catabolism kguD lo 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) (characterized) 37% 95% 169.5 Glyoxylate reductase; EC 1.1.1.26 42% 244.2
D-glucose catabolism kguD lo 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) (characterized) 37% 95% 169.5 Glyoxylate reductase; EC 1.1.1.26 42% 244.2
lactose catabolism kguD lo 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) (characterized) 37% 95% 169.5 Glyoxylate reductase; EC 1.1.1.26 42% 244.2
D-maltose catabolism kguD lo 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) (characterized) 37% 95% 169.5 Glyoxylate reductase; EC 1.1.1.26 42% 244.2
sucrose catabolism kguD lo 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) (characterized) 37% 95% 169.5 Glyoxylate reductase; EC 1.1.1.26 42% 244.2
trehalose catabolism kguD lo 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) (characterized) 37% 95% 169.5 Glyoxylate reductase; EC 1.1.1.26 42% 244.2

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

New query