GapMind for catabolism of small carbon sources

 

Protein WP_011156700.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011156700.1

Length: 554 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 3 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-lactate catabolism lctP hi Glycolate permease, GlcA or YghK (substrates: L-lactate, D-lactate and glycolate) (characterized) 46% 99% 492.7 L-lactate permease 41% 439.5
L-lactate catabolism lctP hi Glycolate permease, GlcA or YghK (substrates: L-lactate, D-lactate and glycolate) (characterized) 46% 99% 492.7
propionate catabolism lctP med L-lactate permease (characterized, see rationale) 44% 99% 479.6 Glycolate permease, GlcA or YghK (substrates: L-lactate, D-lactate and glycolate) 46% 492.7

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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