GapMind for catabolism of small carbon sources

 

Protein WP_011156796.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011156796.1

Length: 253 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 6 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism livG hi ATP-binding component of a broad range amino acid ABC transporter (characterized, see rationale) 41% 89% 200.7 Putative branched-chain amino acid transport system ATP-binding protein, component of The phenylpropeneoid uptake porter, CouPSTW 39% 182.6
L-leucine catabolism livG hi ATP-binding component of a broad range amino acid ABC transporter (characterized, see rationale) 41% 89% 200.7 Putative branched-chain amino acid transport system ATP-binding protein, component of The phenylpropeneoid uptake porter, CouPSTW 39% 182.6
L-valine catabolism livG hi ATP-binding component of a broad range amino acid ABC transporter (characterized, see rationale) 41% 89% 200.7 Putative branched-chain amino acid transport system ATP-binding protein, component of The phenylpropeneoid uptake porter, CouPSTW 39% 182.6
L-arginine catabolism braF med ATP-binding component of a broad range amino acid ABC transporter (characterized, see rationale) 41% 89% 200.7 ABC transporter ATP-binding protein-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM 41% 197.6
L-glutamate catabolism braF med ATP-binding component of a broad range amino acid ABC transporter (characterized, see rationale) 41% 89% 200.7 ABC transporter ATP-binding protein-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM 41% 197.6
L-histidine catabolism braF med ATP-binding component of a broad range amino acid ABC transporter (characterized, see rationale) 41% 89% 200.7 ABC transporter ATP-binding protein-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM 41% 197.6

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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