GapMind for catabolism of small carbon sources

 

Protein WP_011157450.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011157450.1

Length: 443 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 2 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
phenylacetate catabolism paaK hi phenylacetate-CoA ligase (EC 6.2.1.30) (characterized) 68% 99% 582.4 2-hydroxyisobutanoate-CoA ligase 30% 190.3
phenylacetate catabolism paaK hi paaF: phenylacetate-CoA ligase (EC 6.2.1.30) (TIGR02155) 100% 742.1 2-hydroxyisobutanoate-CoA ligase 30% 190.3
L-phenylalanine catabolism paaK hi phenylacetate-CoA ligase (EC 6.2.1.30) (characterized) 68% 99% 582.4 2-hydroxyisobutanoate-CoA ligase 30% 190.3
L-phenylalanine catabolism paaK hi paaF: phenylacetate-CoA ligase (EC 6.2.1.30) (TIGR02155) 100% 742.1 2-hydroxyisobutanoate-CoA ligase 30% 190.3

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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