GapMind for Amino acid biosynthesis

 

Protein WP_011157568.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011157568.1

Length: 385 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 4 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-lysine biosynthesis dapC med succinyldiaminopimelate transaminase (EC 2.6.1.17) (characterized) 43% 95% 292 L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) 42% 294.3
L-methionine biosynthesis metC lo glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) (characterized) 38% 88% 255.8 L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) 42% 294.3
L-phenylalanine biosynthesis ptransferase lo aspartate-prephenate aminotransferase (EC 2.6.1.78) (characterized) 33% 99% 195.7 L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) 42% 294.3
L-tyrosine biosynthesis ptransferase lo aspartate-prephenate aminotransferase (EC 2.6.1.78) (characterized) 33% 99% 195.7 L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) 42% 294.3

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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