GapMind for catabolism of small carbon sources

 

Protein WP_011158720.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011158720.1

Length: 671 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 9 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism pccA hi propionyl-CoA carboxylase α subunit (EC 6.4.1.3) (characterized) 64% 100% 814.3
propionate catabolism pccA hi propionyl-CoA carboxylase α subunit (EC 6.4.1.3) (characterized) 64% 100% 814.3
L-threonine catabolism pccA hi propionyl-CoA carboxylase α subunit (EC 6.4.1.3) (characterized) 64% 100% 814.3
L-valine catabolism pccA hi propionyl-CoA carboxylase α subunit (EC 6.4.1.3) (characterized) 64% 100% 814.3
L-isoleucine catabolism pccA1 hi acyl CoA carboxylase biotin carboxylase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) (characterized) 44% 92% 388.7
propionate catabolism pccA1 hi acyl CoA carboxylase biotin carboxylase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) (characterized) 44% 92% 388.7
L-threonine catabolism pccA1 hi acyl CoA carboxylase biotin carboxylase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) (characterized) 44% 92% 388.7
L-valine catabolism pccA1 hi acyl CoA carboxylase biotin carboxylase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) (characterized) 44% 92% 388.7
L-leucine catabolism liuB med Methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) (characterized) 44% 99% 501.9 propionyl-CoA carboxylase α subunit (EC 6.4.1.3) 64% 814.3

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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