GapMind for catabolism of small carbon sources

 

Protein WP_011160199.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011160199.1

Length: 784 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 3 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-arabinose catabolism aldox-large lo glycolaldehyde oxidoreductase large subunit (characterized) 37% 99% 483.4 anaerobic carbon-monoxide dehydrogenase (subunit 3/3) (EC 1.2.7.4) 41% 583.6
D-xylose catabolism aldox-large lo glycolaldehyde oxidoreductase large subunit (characterized) 37% 99% 483.4 anaerobic carbon-monoxide dehydrogenase (subunit 3/3) (EC 1.2.7.4) 41% 583.6
4-hydroxybenzoate catabolism hcrA lo 4-hydroxybenzoyl-CoA reductase HbaC subunit (EC 1.3.7.9) (characterized) 31% 97% 294.7 anaerobic carbon-monoxide dehydrogenase (subunit 3/3) (EC 1.2.7.4) 41% 583.6

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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