GapMind for catabolism of small carbon sources

 

Protein WP_011160200.1 in Rhodopseudomonas palustris CGA009

Annotation: NCBI__GCF_000195775.1:WP_011160200.1

Length: 266 amino acids

Source: GCF_000195775.1 in NCBI

Candidate for 2 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-arabinose catabolism aldox-med lo Glyceraldehyde dehydrogenase medium chain; Glyceraldehyde dehydrogenase subunit B; Glyceraldehyde dehydrogenase subunit beta; EC 1.2.99.8 (characterized) 33% 97% 141 Carbon monoxide dehydrogenase medium chain; CO dehydrogenase subunit M; CO-DH M; EC 1.2.5.3 37% 165.2
D-xylose catabolism aldox-med lo Glyceraldehyde dehydrogenase medium chain; Glyceraldehyde dehydrogenase subunit B; Glyceraldehyde dehydrogenase subunit beta; EC 1.2.99.8 (characterized) 33% 97% 141 Carbon monoxide dehydrogenase medium chain; CO dehydrogenase subunit M; CO-DH M; EC 1.2.5.3 37% 165.2

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195775.1

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