GapMind for catabolism of small carbon sources

 

Protein WP_011305743.1 in Methanosarcina barkeri Fusaro

Annotation: NCBI__GCF_000195895.1:WP_011305743.1

Length: 355 amino acids

Source: GCF_000195895.1 in NCBI

Candidate for 4 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism prpC lo 2-methylcitrate synthase (EC 2.3.3.5) (characterized) 38% 89% 239.2 citrate (Si)-synthase (EC 2.3.3.1); citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 46% 282.3
propionate catabolism prpC lo 2-methylcitrate synthase (EC 2.3.3.5) (characterized) 38% 89% 239.2 citrate (Si)-synthase (EC 2.3.3.1); citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 46% 282.3
L-threonine catabolism prpC lo 2-methylcitrate synthase (EC 2.3.3.5) (characterized) 38% 89% 239.2 citrate (Si)-synthase (EC 2.3.3.1); citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 46% 282.3
L-valine catabolism prpC lo 2-methylcitrate synthase (EC 2.3.3.5) (characterized) 38% 89% 239.2 citrate (Si)-synthase (EC 2.3.3.1); citrate synthase (unknown stereospecificity) (EC 2.3.3.16) 46% 282.3

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195895.1

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