GapMind for catabolism of small carbon sources

 

Protein WP_011305894.1 in Methanosarcina barkeri Fusaro

Annotation: NCBI__GCF_000195895.1:WP_011305894.1

Length: 403 amino acids

Source: GCF_000195895.1 in NCBI

Candidate for 17 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-arginine catabolism rocD med Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 (characterized) 40% 99% 291.6 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-citrulline catabolism rocD med Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 (characterized) 40% 99% 291.6 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-arginine catabolism astC med succinylornithine transaminase (EC 2.6.1.81) (characterized) 40% 98% 276.9 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-citrulline catabolism astC med succinylornithine transaminase (EC 2.6.1.81) (characterized) 40% 98% 276.9 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-arginine catabolism patA med putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) (characterized) 44% 81% 269.2 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-citrulline catabolism patA med putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) (characterized) 44% 81% 269.2 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-lysine catabolism patA med putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) (characterized) 44% 81% 269.2 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
putrescine catabolism patA med putrescine-2-oxoglutarate transaminase (EC 2.6.1.82) (characterized) 44% 81% 269.2 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-lysine catabolism lat lo Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 (characterized) 36% 96% 245 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-arginine catabolism davT lo 5-aminovalerate transaminase (EC 2.6.1.48) (characterized) 35% 98% 233.4 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-citrulline catabolism davT lo 5-aminovalerate transaminase (EC 2.6.1.48) (characterized) 35% 98% 233.4 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-lysine catabolism davT lo 5-aminovalerate transaminase (EC 2.6.1.48) (characterized) 35% 98% 233.4 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-proline catabolism davT lo 5-aminovalerate transaminase (EC 2.6.1.48) (characterized) 35% 98% 233.4 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-arginine catabolism gabT lo 4-aminobutyrate aminotransferase; EC 2.6.1.19 (characterized, see rationale) 37% 97% 230.7 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-citrulline catabolism gabT lo 4-aminobutyrate aminotransferase; EC 2.6.1.19 (characterized, see rationale) 37% 97% 230.7 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
putrescine catabolism gabT lo 4-aminobutyrate aminotransferase; EC 2.6.1.19 (characterized, see rationale) 37% 97% 230.7 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9
L-lysine catabolism lysN lo 2-aminoadipate transaminase (EC 2.6.1.39) (characterized) 35% 96% 226.5 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11 45% 328.9

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195895.1

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