GapMind for Amino acid biosynthesis

 

Protein WP_011307241.1 in Methanosarcina barkeri Fusaro

Annotation: NCBI__GCF_000195895.1:WP_011307241.1

Length: 163 amino acids

Source: GCF_000195895.1 in NCBI

Candidate for 3 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine biosynthesis leuD hi 3-isopropylmalate dehydratase (EC 4.2.1.33) (characterized) 55% 99% 173.3 Methanogen homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114 55% 161.4
L-isoleucine biosynthesis leuD med 3-isopropylmalate dehydratase, small subunit (TIGR02087) 99% 239.4 Methanogen homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114 55% 161.4
L-leucine biosynthesis leuD hi 3-isopropylmalate dehydratase (EC 4.2.1.33) (characterized) 55% 99% 173.3 Methanogen homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114 55% 161.4
L-leucine biosynthesis leuD med 3-isopropylmalate dehydratase, small subunit (TIGR02087) 99% 239.4 Methanogen homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114 55% 161.4
L-lysine biosynthesis lysU med Methanogen homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114 (characterized) 55% 92% 157.5 3-isopropylmalate dehydratase (EC 4.2.1.33) 55% 174.9

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195895.1

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