Protein WP_011307344.1 in Methanosarcina barkeri Fusaro

GapMind for catabolism of small carbon sources

Protein WP_011307344.1 in Methanosarcina barkeri Fusaro

Annotation: NCBI__GCF_000195895.1:WP_011307344.1

Length: 274 amino acids

Source: GCF_000195895.1 in NCBI

Candidate for 3 steps in catabolism of small carbon sources

Pathway	Step	Score	Similar to	Id.	Cov.	Bits	Other hit	Other id.	Other bits
L-histidine catabolism	hutW	med	ABC transporter for L-Histidine, permease component (characterized)	52%	93%	255	OtaB, component of The salt-induced glycine betaine OtaABC transporter	72%	385.6
L-proline catabolism	hutW	med	HutW aka HISW, component of Uptake system for hisitidine, proline, proline-betaine and glycine-betaine (characterized)	50%	94%	240.4	OtaB, component of The salt-induced glycine betaine OtaABC transporter	72%	385.6
L-proline catabolism	proW	med	Glycine betaine/proline betaine transport system permease protein ProW (characterized)	44%	75%	235.7	OtaB, component of The salt-induced glycine betaine OtaABC transporter	72%	385.6

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195895.1