GapMind for Amino acid biosynthesis

 

Protein WP_011307957.1 in Methanosarcina barkeri Fusaro

Annotation: NCBI__GCF_000195895.1:WP_011307957.1

Length: 394 amino acids

Source: GCF_000195895.1 in NCBI

Candidate for 6 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-cysteine biosynthesis CGL med cystathionine gamma-lyase (EC 4.4.1.1) (characterized) 47% 100% 351.3 methionine gamma-lyase (EC 4.4.1.11); alliin lyase (EC 4.4.1.4) 56% 446.8
L-methionine biosynthesis metB med Cystathionine gamma-synthase; CGS; EC 2.5.1.48; O-succinylhomoserine (thiol)-lyase (uncharacterized) 47% 99% 349.4 methionine gamma-lyase (EC 4.4.1.11); alliin lyase (EC 4.4.1.4) 56% 446.8
L-methionine biosynthesis metC med cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) (characterized) 46% 98% 334.7 methionine gamma-lyase (EC 4.4.1.11); alliin lyase (EC 4.4.1.4) 56% 446.8
L-methionine biosynthesis metZ med O-succinylhomoserine sulfhydrylase; OSH sulfhydrylase; OSHS sulfhydrylase; EC 2.5.1.- (characterized) 43% 96% 313.9 methionine gamma-lyase (EC 4.4.1.11); alliin lyase (EC 4.4.1.4) 56% 446.8
L-methionine biosynthesis metY med O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (characterized) 42% 91% 290.4 methionine gamma-lyase (EC 4.4.1.11); alliin lyase (EC 4.4.1.4) 56% 446.8
L-cysteine biosynthesis cysK lo Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 (characterized) 41% 50% 158.7 methionine gamma-lyase (EC 4.4.1.11); alliin lyase (EC 4.4.1.4) 56% 446.8

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000195895.1

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