Align ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) (characterized)
to candidate WP_011317028.1 AVA_RS00670 ketol-acid reductoisomerase
Query= BRENDA::C8WR67 (344 letters) >NCBI__GCF_000204075.1:WP_011317028.1 Length = 331 Score = 448 bits (1152), Expect = e-130 Identities = 221/329 (67%), Positives = 266/329 (80%), Gaps = 1/329 (0%) Query: 1 MEKIYYDADISIQPLADKRIAVIGYGSQGHAHAQNLRDSGFDVVIGLRPGSSWA-KAEAD 59 M ++YYD D ++ LA K IA+IGYGSQGHAHA NL+DSG +V++GL PGS A KA+A Sbjct: 1 MARMYYDEDANLDLLAGKTIAIIGYGSQGHAHALNLKDSGLNVIVGLYPGSKSAEKAQAA 60 Query: 60 GFRVMAVGEAVEESDVIMILLPDERQPAVYEREIRPYLTAGKALAFAHGFNIHFSQIQPP 119 G V V +A +D IMILLPDE Q VY+ EI P L G LAFAHGFNIHF Q+ PP Sbjct: 61 GLTVKNVADAANVADFIMILLPDEVQKTVYKNEIEPNLQEGNTLAFAHGFNIHFGQVVPP 120 Query: 120 KDVDVFMVAPKGPGHLVRRVYEAGGGVPALIAVHQDASGQAKDLALAYARGIGAGRAGIL 179 +VDV MVAPKGPGHLVRR YE G GVPAL AV+QDASG+A+D AL+YA+GIG R G+L Sbjct: 121 ANVDVVMVAPKGPGHLVRRTYEQGQGVPALFAVYQDASGKARDRALSYAKGIGGTRGGVL 180 Query: 180 TTTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPEIAYFECLHEMKLIVDLIY 239 TTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPE+AYFECLHE+KLIVDL+ Sbjct: 181 ETTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLVV 240 Query: 240 EGGLEYMRYSISDTAQWGDFTSGPRIINEETKKEMRRILADIQSGAFAKSWILENQANRP 299 EGGL MR SIS+TA++GD+T GPRI+NE+TK EMR++L++IQSG FA+ ++LENQ+ +P Sbjct: 241 EGGLAKMRDSISNTAEYGDYTRGPRIVNEQTKAEMRKVLSEIQSGQFAREFVLENQSGKP 300 Query: 300 MFNAINRRELEHPIEVVGRKLRSMMPFIK 328 F A+ R+E EHPIE VG+ LR+M ++K Sbjct: 301 GFTAMRRQEAEHPIEEVGKDLRAMFSWLK 329 Lambda K H 0.320 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 389 Number of extensions: 13 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 344 Length of database: 331 Length adjustment: 28 Effective length of query: 316 Effective length of database: 303 Effective search space: 95748 Effective search space used: 95748 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate WP_011317028.1 AVA_RS00670 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.9262.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.9262.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.