Align ketol-acid reductoisomerase (NAD+) (EC 1.1.1.382); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) (characterized)
to candidate WP_011317028.1 AVA_RS00670 ketol-acid reductoisomerase
Query= BRENDA::C8WR67
(344 letters)
>NCBI__GCF_000204075.1:WP_011317028.1
Length = 331
Score = 448 bits (1152), Expect = e-130
Identities = 221/329 (67%), Positives = 266/329 (80%), Gaps = 1/329 (0%)
Query: 1 MEKIYYDADISIQPLADKRIAVIGYGSQGHAHAQNLRDSGFDVVIGLRPGSSWA-KAEAD 59
M ++YYD D ++ LA K IA+IGYGSQGHAHA NL+DSG +V++GL PGS A KA+A
Sbjct: 1 MARMYYDEDANLDLLAGKTIAIIGYGSQGHAHALNLKDSGLNVIVGLYPGSKSAEKAQAA 60
Query: 60 GFRVMAVGEAVEESDVIMILLPDERQPAVYEREIRPYLTAGKALAFAHGFNIHFSQIQPP 119
G V V +A +D IMILLPDE Q VY+ EI P L G LAFAHGFNIHF Q+ PP
Sbjct: 61 GLTVKNVADAANVADFIMILLPDEVQKTVYKNEIEPNLQEGNTLAFAHGFNIHFGQVVPP 120
Query: 120 KDVDVFMVAPKGPGHLVRRVYEAGGGVPALIAVHQDASGQAKDLALAYARGIGAGRAGIL 179
+VDV MVAPKGPGHLVRR YE G GVPAL AV+QDASG+A+D AL+YA+GIG R G+L
Sbjct: 121 ANVDVVMVAPKGPGHLVRRTYEQGQGVPALFAVYQDASGKARDRALSYAKGIGGTRGGVL 180
Query: 180 TTTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPEIAYFECLHEMKLIVDLIY 239
TTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPE+AYFECLHE+KLIVDL+
Sbjct: 181 ETTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLVV 240
Query: 240 EGGLEYMRYSISDTAQWGDFTSGPRIINEETKKEMRRILADIQSGAFAKSWILENQANRP 299
EGGL MR SIS+TA++GD+T GPRI+NE+TK EMR++L++IQSG FA+ ++LENQ+ +P
Sbjct: 241 EGGLAKMRDSISNTAEYGDYTRGPRIVNEQTKAEMRKVLSEIQSGQFAREFVLENQSGKP 300
Query: 300 MFNAINRRELEHPIEVVGRKLRSMMPFIK 328
F A+ R+E EHPIE VG+ LR+M ++K
Sbjct: 301 GFTAMRRQEAEHPIEEVGKDLRAMFSWLK 329
Lambda K H
0.320 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 389
Number of extensions: 13
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 331
Length adjustment: 28
Effective length of query: 316
Effective length of database: 303
Effective search space: 95748
Effective search space used: 95748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)
Align candidate WP_011317028.1 AVA_RS00670 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.24797.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.24797.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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