Align acetylglutamate kinase (EC 2.7.2.8) (characterized)
to candidate WP_011317428.1 AVA_RS02805 acetylglutamate kinase
Query= BRENDA::Q6V1L5 (301 letters) >NCBI__GCF_000204075.1:WP_011317428.1 Length = 297 Score = 435 bits (1118), Expect = e-127 Identities = 215/290 (74%), Positives = 251/290 (86%) Query: 4 EFIEAGAADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMR 63 E+I A RV++LSEALPY+QQFAGRTVVVKYGGAAMK LK+ V+RDIVFL+CVG+R Sbjct: 7 EYIRQAEATRVQVLSEALPYIQQFAGRTVVVKYGGAAMKDSHLKDQVIRDIVFLSCVGLR 66 Query: 64 PVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGG 123 P++VHGGGPEIN+WL ++GIE QF NGLRVTDA TM+VVEMVLVGRVNK+IVS IN GG Sbjct: 67 PILVHGGGPEINSWLDKLGIEAQFKNGLRVTDAPTMDVVEMVLVGRVNKEIVSLINQAGG 126 Query: 124 RAVGFCGTDGRLVLARPHDQEGIGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQS 183 AVG CG DG L+ ARP QEGIGFVGEV++VN +++E L GYIPV+SSVAAD++GQ+ Sbjct: 127 LAVGLCGKDGNLITARPQGQEGIGFVGEVSNVNIKILETLASNGYIPVVSSVAADDSGQA 186 Query: 184 FNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELIAQGIVGG 243 +NINADTVAGEIAAAL AEKLILLTDTRGIL+D K P +LIP+++I ++RELI G+V G Sbjct: 187 YNINADTVAGEIAAALGAEKLILLTDTRGILKDYKDPGTLIPKVDIREARELINGGVVSG 246 Query: 244 GMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGY 293 GMIPKV CC+RSLAQGVRAAHIIDGRIPHALLLEIFTD GIGTMI+GS Y Sbjct: 247 GMIPKVTCCVRSLAQGVRAAHIIDGRIPHALLLEIFTDVGIGTMILGSQY 296 Lambda K H 0.320 0.139 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 391 Number of extensions: 14 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 301 Length of database: 297 Length adjustment: 27 Effective length of query: 274 Effective length of database: 270 Effective search space: 73980 Effective search space used: 73980 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 48 (23.1 bits)
Align candidate WP_011317428.1 AVA_RS02805 (acetylglutamate kinase)
to HMM TIGR00761 (argB: acetylglutamate kinase (EC 2.7.2.8))
../bin/blast/fastacmd -i /tmp/list.29132.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.29132.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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