Align Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 (characterized)
to candidate WP_011318049.1 AVA_RS06110 acetate--CoA ligase
Query= SwissProt::P31638
(660 letters)
>NCBI__GCF_000204075.1:WP_011318049.1
Length = 657
Score = 746 bits (1926), Expect = 0.0
Identities = 373/659 (56%), Positives = 478/659 (72%), Gaps = 13/659 (1%)
Query: 4 IESVMQEHRVFNPPEGFASQAAIPSMEAYQALCDEAERDYEGFWARHARELLHWTKPFTK 63
IES++QE R+F+P F+ A I S+E YQ L D+A+ D + FWA A LHW + +
Sbjct: 6 IESILQEKRLFHPSAEFSQNAQIKSLEDYQRLYDKAKADPQKFWAELAETELHWFQKWDT 65
Query: 64 VLDQSNAPFYKWFEDGELNASYNCLDRNLQNGNADKVAIVFEADDGSVTRVTYRELHGKV 123
VLD APF KWF G++N SYNCLDR+L +K A+++E + G +TY +LH +V
Sbjct: 66 VLDWQ-APFAKWFVGGKINISYNCLDRHLTTWRKNKAALIWEGEPGDSRTLTYAQLHREV 124
Query: 124 CRFANGLKALGIRKGDRVVIYMPMSVEGVVAMQACARLGATHSVVFGGFSAKSLQERLVD 183
C+FAN LK LG++KGDRV IYMPM E +AM ACAR+GA HSVVFGGFSA++L++RL+D
Sbjct: 125 CQFANVLKQLGVQKGDRVGIYMPMIPEAAIAMLACARIGAPHSVVFGGFSAEALRDRLID 184
Query: 184 VGAVALITADEQMRGGKALPLKAIADDALALGGCEAVRNVIVYRRTGGKVAWT-EGRDRW 242
A ++TAD R +PLK D ALA G +V NV+V +RTG + GRD W
Sbjct: 185 AQAKVVVTADGGWRKDAIVPLKEQVDKALADGAVPSVENVLVVKRTGQDIYMQLGGRDHW 244
Query: 243 MEDVSAGQPDTCEAEPVSAEHPLFVLYTSGSTGKPKGVQHSTGGYLLWALMTMKWTFDIK 302
D+ G C AEP+ +E LFVLYTSGSTGKPKGV H+TGGY L+ MT KW FD++
Sbjct: 245 WHDLQKGASADCPAEPMDSEDLLFVLYTSGSTGKPKGVVHTTGGYNLYTHMTTKWIFDLQ 304
Query: 303 PDDLFWCTADIGWVTGHTYIAYGPLAAGATQVVFEGVPTYPNAGRFWDMIARHKVSIFYT 362
D++WCTAD+GW+TGH+YI YGPL+ GAT +++EG P N G FWD+I ++ V+IFYT
Sbjct: 305 DTDVYWCTADVGWITGHSYIVYGPLSNGATTLMYEGAPRASNPGCFWDVIEKYGVNIFYT 364
Query: 363 APTAIRSLIKAAEADEKIHPKQYDLSSLRLLGTVGEPINPEAWMWYYKNIGNERCPIVDT 422
APTAIR+ IK E HP +LSSLRLLGTVGEPINPEAWMWY+K IG +RCPIVDT
Sbjct: 365 APTAIRAFIKMGEH----HPNARNLSSLRLLGTVGEPINPEAWMWYHKVIGGDRCPIVDT 420
Query: 423 FWQTETGGHMITPLPGATPLVPGSCTLPLPGIMAAIVDETGHDVPNGNGGILVVKRPWPA 482
+WQTETGG MITPLPGA PGS TLP PGI+A IVD G+ VP GG L V+ PWP
Sbjct: 421 WWQTETGGIMITPLPGAISTKPGSATLPFPGILADIVDLDGNTVPQNEGGYLAVRYPWPG 480
Query: 483 MIRTIWGDPERFRKSYF---PEELGGKLYLAGDGSIRDKDTGYFTIMGRIDDVLNVSGHR 539
M+RT++GDPERFR++Y+ P + G Y AGDG+ +D+D GYF +MGR+DDVLNVSGHR
Sbjct: 481 MMRTVYGDPERFRRTYWEHIPPKDGNYTYFAGDGARKDED-GYFWVMGRVDDVLNVSGHR 539
Query: 540 MGTMEIESALVSNPLVAEAAVVGRPDDMTGEAICAFVVLKRSRPTGEEAVKIATELRNWV 599
+GTME+ESALVS+P VAEAAVVG+PDD+ GE + AFV L+ + ++ K+ L+ V
Sbjct: 540 LGTMEVESALVSHPAVAEAAVVGKPDDLKGEEVVAFVTLEGTYQASDDLSKV---LKQHV 596
Query: 600 GKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRSLAKGEEITQDTSTLENPAILEQLKQ 658
+EIG IA+P +IRF D LPKTRSGKIMRRLLR+LA G+E++ DTSTLE+ ++L++L++
Sbjct: 597 VQEIGAIARPGEIRFTDALPKTRSGKIMRRLLRNLAAGQEVSGDTSTLEDRSVLDKLRE 655
Lambda K H
0.319 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1408
Number of extensions: 73
Number of successful extensions: 7
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 657
Length adjustment: 38
Effective length of query: 622
Effective length of database: 619
Effective search space: 385018
Effective search space used: 385018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Align candidate WP_011318049.1 AVA_RS06110 (acetate--CoA ligase)
to HMM TIGR02188 (acs: acetate--CoA ligase (EC 6.2.1.1))
../bin/blast/fastacmd -i /tmp/list.26446.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.26446.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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