GapMind for Amino acid biosynthesis

 

Protein WP_011610162.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011610162.1

Length: 534 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 3 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine biosynthesis cimA hi (R)-citramalate synthase (EC 2.3.3.21) (characterized) 54% 98% 565.1 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 33% 195.7
L-isoleucine biosynthesis cimA hi cimA: citramalate synthase (EC 2.3.1.182) (TIGR00977) 99% 892.2 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 33% 195.7
L-leucine biosynthesis leuA lo Probable 2-isopropylmalate synthase; EC 2.3.3.13; Alpha-IPM synthase; Alpha-isopropylmalate synthase (uncharacterized) 30% 98% 218.8 (R)-citramalate synthase (EC 2.3.3.21) 54% 565.1
L-lysine biosynthesis hcs lo Homocitrate synthase AksA; EC 2.3.3.14; (R)-homo(2)citrate synthase; EC 2.3.3.-; (R)-homo(3)citrate synthase; EC 2.3.3.- (uncharacterized) 34% 94% 201.8 (R)-citramalate synthase (EC 2.3.3.21) 54% 565.1

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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