GapMind for catabolism of small carbon sources

 

Protein WP_011610169.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011610169.1

Length: 390 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 3 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-phenylalanine catabolism ARO8 hi aspartate transaminase (EC 2.6.1.1) (characterized) 74% 100% 589.3
L-lysine catabolism lysN med Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 (characterized) 41% 95% 319.3 aspartate transaminase (EC 2.6.1.1) 74% 589.3
L-arginine catabolism aruH lo arginine-pyruvate transaminase (EC 2.6.1.84) (characterized) 31% 92% 198.7 aspartate transaminase (EC 2.6.1.1) 74% 589.3

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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