GapMind for catabolism of small carbon sources

 

Protein WP_011610496.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011610496.1

Length: 869 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 5 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
citrate catabolism acn hi aconitate hydratase (EC 4.2.1.3) (characterized) 66% 99% 1121.7
citrate catabolism acn hi acnB: aconitate hydratase 2 (EC 4.2.1.3) (TIGR00117) 100% 1580.5
L-isoleucine catabolism acn hi aconitate hydratase (EC 4.2.1.3) (characterized) 66% 99% 1121.7
propionate catabolism acn hi aconitate hydratase (EC 4.2.1.3) (characterized) 66% 99% 1121.7
L-threonine catabolism acn hi aconitate hydratase (EC 4.2.1.3) (characterized) 66% 99% 1121.7
L-valine catabolism acn hi aconitate hydratase (EC 4.2.1.3) (characterized) 66% 99% 1121.7

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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