GapMind for catabolism of small carbon sources

 

Protein WP_011611485.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011611485.1

Length: 349 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 2 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-mannitol catabolism manA lo mannose-1-phosphate guanylyltransferase (EC 2.7.7.13); glucose-1-phosphate guanylyltransferase (EC 2.7.7.34); aldose-1-phosphate nucleotidyltransferase (EC 2.7.7.37); mannose-6-phosphate isomerase (EC 5.3.1.8) (characterized) 37% 74% 209.1 Mannose-1-phosphate guanylyltransferase 2; GDP-mannose pyrophosphorylase 2; GMP 2; GMPP 2; EC 2.7.7.13 39% 225.7
D-mannose catabolism manA lo mannose-1-phosphate guanylyltransferase (EC 2.7.7.13); glucose-1-phosphate guanylyltransferase (EC 2.7.7.34); aldose-1-phosphate nucleotidyltransferase (EC 2.7.7.37); mannose-6-phosphate isomerase (EC 5.3.1.8) (characterized) 37% 74% 209.1 Mannose-1-phosphate guanylyltransferase 2; GDP-mannose pyrophosphorylase 2; GMP 2; GMPP 2; EC 2.7.7.13 39% 225.7

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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