GapMind for Amino acid biosynthesis

 

Protein WP_011612205.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011612205.1

Length: 423 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 9 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-arginine biosynthesis argD hi acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) (characterized) 69% 99% 604.4
L-proline biosynthesis argD hi acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) (characterized) 69% 99% 604.4
L-arginine biosynthesis argD'B hi Succinylornithine transaminase (EC 2.6.1.81) (characterized) 44% 96% 338.6
L-lysine biosynthesis dapC med acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (characterized) 44% 99% 313.5 acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) 69% 604.4
L-proline biosynthesis OAT lo ornithine aminotransferase (EC 2.6.1.13) (characterized) 36% 89% 267.3 acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) 69% 604.4
L-lysine biosynthesis lysJ lo [amino group carrier protein]-gamma-(L-lysyl)-L-glutamate aminotransferase (EC 2.6.1.118) (characterized) 38% 96% 266.2 acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) 69% 604.4
L-arginine biosynthesis lysJ lo [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) (characterized) 34% 98% 253.4 acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) 69% 604.4
L-proline biosynthesis lysJ lo [amino group carrier protein]-C-terminal-L-glutamyl-γ-L-lysine aminotransferase (EC 2.6.1.118; EC 2.6.1.124) (characterized) 34% 98% 253.4 acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) 69% 604.4
L-lysine biosynthesis lysN lo 2-aminoadipate transaminase; 2-aminoadipate aminotransferase; L-2AA aminotransferase; EC 2.6.1.39 (characterized) 33% 96% 214.2 acetylornithine transaminase (EC 2.6.1.11); 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19) 69% 604.4

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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