GapMind for Amino acid biosynthesis

 

Protein WP_011612267.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011612267.1

Length: 387 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 8 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
glycine biosynthesis agx1 med alanine—glyoxylate transaminase (EC 2.6.1.44) (characterized) 40% 100% 320.1 aromatic-amino-acid transaminase (EC 2.6.1.57) 41% 292.0
L-tyrosine biosynthesis tyrB med Aspartate aminotransferase; AspAT; EC 2.6.1.1; Transaminase A (uncharacterized) 40% 93% 295.4 alanine—glyoxylate transaminase (EC 2.6.1.44) 40% 320.1
L-phenylalanine biosynthesis ptransferase lo Probable aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78; Transaminase A (uncharacterized) 39% 99% 287.7 alanine—glyoxylate transaminase (EC 2.6.1.44) 40% 320.1
L-tyrosine biosynthesis ptransferase lo Probable aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78; Transaminase A (uncharacterized) 39% 99% 287.7 alanine—glyoxylate transaminase (EC 2.6.1.44) 40% 320.1
L-lysine biosynthesis dapX lo Probable N-acetyl-LL-diaminopimelate aminotransferase; Putative aminotransferase A; EC 2.6.1.- (characterized) 37% 96% 267.3 alanine—glyoxylate transaminase (EC 2.6.1.44) 40% 320.1
L-lysine biosynthesis lysN lo Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 (characterized) 32% 96% 254.2 alanine—glyoxylate transaminase (EC 2.6.1.44) 40% 320.1
L-lysine biosynthesis DAPtransferase lo LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 (uncharacterized) 33% 99% 211.5 alanine—glyoxylate transaminase (EC 2.6.1.44) 40% 320.1
L-methionine biosynthesis metC lo glutamine-pyruvate transaminase (EC 2.6.1.15); kynurenine-oxoglutarate transaminase (EC 2.6.1.7); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) (characterized) 31% 78% 152.1 alanine—glyoxylate transaminase (EC 2.6.1.44) 40% 320.1

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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