GapMind for catabolism of small carbon sources

 

Protein WP_011612795.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011612795.1

Length: 473 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 4 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism lpd lo Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 (characterized) 37% 96% 256.1 mercury(II) reductase (EC 1.16.1.1) 38% 300.1
L-leucine catabolism lpd lo Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 (characterized) 37% 96% 256.1 mercury(II) reductase (EC 1.16.1.1) 38% 300.1
L-threonine catabolism lpd lo Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 (characterized) 37% 96% 256.1 mercury(II) reductase (EC 1.16.1.1) 38% 300.1
L-valine catabolism lpd lo Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 (characterized) 37% 96% 256.1 mercury(II) reductase (EC 1.16.1.1) 38% 300.1

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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