GapMind for catabolism of small carbon sources

 

Protein WP_011612823.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011612823.1

Length: 398 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 8 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-fructose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 458.8 Phosphoglycerate kinase; EC 2.7.2.3 78% 611.3
L-fucose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 458.8 Phosphoglycerate kinase; EC 2.7.2.3 78% 611.3
D-galactose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 458.8 Phosphoglycerate kinase; EC 2.7.2.3 78% 611.3
glycerol catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 458.8 Phosphoglycerate kinase; EC 2.7.2.3 78% 611.3
lactose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 458.8 Phosphoglycerate kinase; EC 2.7.2.3 78% 611.3
myo-inositol catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 458.8 Phosphoglycerate kinase; EC 2.7.2.3 78% 611.3
L-rhamnose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 458.8 Phosphoglycerate kinase; EC 2.7.2.3 78% 611.3
sucrose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 458.8 Phosphoglycerate kinase; EC 2.7.2.3 78% 611.3

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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